Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0008 |
Symbol | |
ID | 4625097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 13204 |
End bp | 15375 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639795201 |
Product | UvrD/REP helicase |
Protein accession | YP_941482 |
Protein GI | 119943802 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.680024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTTT CCTACTTAAT TGATGATTTA AATGATCACC AGCGTGCTGC TGTTTCCGCA CCCGAGCAGA ATATGCTGGT TTTAGCCGGT GCCGGTAGTG GTAAAACACG TGTATTAACG CATCGAATCG CATGGTTGAT GCAGGTAGAA AACATTCCAA CATATTCTAT TTTGGCGGTT ACCTTTACCA ATAAAGCCGC CAAGGAGATG CGTGGCCGTA TTACGGATAT TTGCCCGCAA CAGATAGGCG GGATGTGGAT AGGTACTTTC CATGGCACCG CCCACCGCTT ATTGCGCCTG CATTATCAAG AAGCTAATTT ACCTGAACAG TTTCAAATAA TTGATAGCGA TGATCAAAAA AAAATGGTCA AACGTATTAT CAAAAGTCTT AATTTAGATG AAAAATATTA CCCTGCTAAA GAGTTACAGT GGTATATCAA CGATAAAAAA GATGAGGGTT TACGGGCAAA ACATATTCAG GTTGGTTATA GCCAGCAGGA AAAACAACGC CTGCAGGTTT ATCAAGCCTA CGAAGAGGCT TGCCAACTTG CCGGATTAGT TGATTTCGCA GAATTATTAT TACGTGCCCA CGAATTGTTA TTAAATAACC CTTCTCTGTT ATTACATTAT CAGCAACGTT TCCGCCATGT GTTGGTCGAT GAGTTTCAGG ATACCAATAA ACTTCAATAT GCCTGGTTAA ACCTGCTTAC CGAGAACAAC AGTTATTTGA CCATAGTCGG AGATGATGAC CAGTCAATTT ATGGTTGGCG GGGCGCTGAC GTTGAGAATA TTCAACGTTT TTTAAGGGAA AAAGATAATC CGGTGACGGT CTGCTTAGAG CAAAACTACC GATCAACGGG ACATATATTA AATGCCTCTA ACCAGCTTAT TAAAAATAAT AGTGACAGAT TAGGCAAAGA GTTATGGACC AGCGGTGAAG ATGGGCAACC CATTGCCATT TACAGTGCAT TTAATGATTA TGATGAAACA CGTTATGTTA CCTCGCAGTT AAAACTATGG CAAAATAGTG GTAAAAAGCT GGCTGAATGT GCCATTTTAT ACCGTAGCAA TGCACAATCT CGTCTTTTTG AAGAACAGTT AATGGCACAA CAGATTCCCT ACCATATTTA TGGTGGTCAG CGCTTCTTTG ATCGTTTAGA GATAAAAGAC AGTATCGCCT ATCTGCGCTT AATCAATAAT CATCAAGATG ATGCGGCATT TGAACGTATT ATCAATAAAC CTAAACGTAA AATTGGTAAT ACCACACTTG ATAAGATTCG ACTTTGTGCC CGCGAGCAGG GTTATACCAT GTGGCAGGCG AGTCTGTTTT TAATTGAGCA AAAACAACTG AGTGCGGGTG CGAATATTTC ATTATCCGGA TTTATTGAAT TAATAAAGCG TTTTGAAAAT GAAACCTCTG AGCTGCCTTT GTTTCAGACG GTTGACCATG TGATCCGTCA CTCCGGTTTG CATAGCATGT TCGAAAATGA AAAAGGTGAA AAATCACGCA GCCGTATAGA AAATTTACAA GAGCTAGTTT CTGCAACTAA ATCCTTTGTG ATCCCCCCCG AAGAGCAGGA AATGAGCGAG GTCACGGCCT TTTTAGCTTA TGCAGCGCTG GAATCAGGTG ATAACCAGGC CGATGAATTT GATGATGCAG TACAACTAAT GACCATGCAT GCGGCAAAAG GATTAGAGTT CCCGCAAGTC TTTATGGTGG GTGTGGAAGA AGGCATGTTT CCCGGACAGC AATCTGCCGA CGATGAAGTG CGCTTAGCCG AAGAACGTCG CCTTTGTTAT GTTGGTATGA CCAGAGCAAT GCAAAAACTA ACCCTTTGTC ATGCCGAAAG CCGCCGTTTA TACGGACAAG AGAAATTCCA TTCTCCTTCT CGTTTTATTA GCGAGCTGCC AGAACAGGAT ATTGAATATA TTCGTCTTAA AACCCAGGTC CGAAGAGTCC AGCAACCTAC CGTTAAGCAG CCCGCATTTA CCCGGGAAAA TCAGGATATT TCAGGCTTTA GGATTGGCCA GCAAGTAACC CATCCTAAGT TTGGAGAAGG CACTGTTATT GCGCAGGAGG GCAGCGGAGA AAACAGTCGC TTACAAGTGA ATTTTATGGG AGTAGGCAGT AAATGGTTAA TGACCGCTTA CGCTCGTCTC GAGACAGTAT AG
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Protein sequence | MDVSYLIDDL NDHQRAAVSA PEQNMLVLAG AGSGKTRVLT HRIAWLMQVE NIPTYSILAV TFTNKAAKEM RGRITDICPQ QIGGMWIGTF HGTAHRLLRL HYQEANLPEQ FQIIDSDDQK KMVKRIIKSL NLDEKYYPAK ELQWYINDKK DEGLRAKHIQ VGYSQQEKQR LQVYQAYEEA CQLAGLVDFA ELLLRAHELL LNNPSLLLHY QQRFRHVLVD EFQDTNKLQY AWLNLLTENN SYLTIVGDDD QSIYGWRGAD VENIQRFLRE KDNPVTVCLE QNYRSTGHIL NASNQLIKNN SDRLGKELWT SGEDGQPIAI YSAFNDYDET RYVTSQLKLW QNSGKKLAEC AILYRSNAQS RLFEEQLMAQ QIPYHIYGGQ RFFDRLEIKD SIAYLRLINN HQDDAAFERI INKPKRKIGN TTLDKIRLCA REQGYTMWQA SLFLIEQKQL SAGANISLSG FIELIKRFEN ETSELPLFQT VDHVIRHSGL HSMFENEKGE KSRSRIENLQ ELVSATKSFV IPPEEQEMSE VTAFLAYAAL ESGDNQADEF DDAVQLMTMH AAKGLEFPQV FMVGVEEGMF PGQQSADDEV RLAEERRLCY VGMTRAMQKL TLCHAESRRL YGQEKFHSPS RFISELPEQD IEYIRLKTQV RRVQQPTVKQ PAFTRENQDI SGFRIGQQVT HPKFGEGTVI AQEGSGENSR LQVNFMGVGS KWLMTAYARL ETV
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