Gene Ping_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0004 
Symbol 
ID4625093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp9207 
End bp9761 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content41% 
IMG OID639795197 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_941478 
Protein GI119943798 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCA TTGTTTCAGT ACGTCGTGGC AACCAAGTTG TTGTCGGTGG TGATGGTCAA 
GTTTCTCTTG GCAATACGGT TATGAAAGGT AACGCACGTA AAGTACACAG ACTCTATAAC
AATCAAGTAA TAGCTGGTTT TGCTGGCGGT ACAGCTGATG CATTTACCCT GTTAGAACGT
TTTGAGGCTA AGCTTCAGGC ACACCAGGGT AATCTTGAAC GAGCAGCGGT TGAATTAGCG
AAAGACTGGC GTACCGATCG ATCGTTGCGC AGACTTGAAG CGCTATTAGC TGTGGCGGAT
AAAAACTCTT CTTATATTAT TACTGGTAAT GGTGATGTAG TCAGACCTGA AAATGATTTA
ATGGCGATCG GCTCTGGTGG TTATTTTGCA CAATCGGCAG CGATTGCCTT GTTAGAAAAT
ACCGATTTAG ACGCGAAAAC AATTGTCGAA AAAGCATTGG CTATAGCAGG CAATATTTGT
GTTTTTACTA ATGAAACTCA CACTATTGAA TGCATTGATT TCTCTGATGA AATTACTACT
GAAAGTAAAA AATAG
 
Protein sequence
MTTIVSVRRG NQVVVGGDGQ VSLGNTVMKG NARKVHRLYN NQVIAGFAGG TADAFTLLER 
FEAKLQAHQG NLERAAVELA KDWRTDRSLR RLEALLAVAD KNSSYIITGN GDVVRPENDL
MAIGSGGYFA QSAAIALLEN TDLDAKTIVE KALAIAGNIC VFTNETHTIE CIDFSDEITT
ESKK