| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0003 |
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| Symbol | hslU |
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| ID | 4625092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 7861 |
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| End bp | 9195 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639795196 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_941477 |
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| Protein GI | 119943797 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.834513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAATA TGACACCAAA AGAAATTAAA CATGAGTTAG ATCGCCATAT CATTGGACAA
GACAATGCCA AACGAGCTGT TGCTATTGCA CTTCGTAATC GCTGGCGCCG TATGCAGCTT
GATAAAGAAA TGCGTCAAGA AGTCACCCCA AAGAATATTT TAATGATCGG TCCTACCGGT
GTAGGTAAAA CAGAGATTGC GCGCCGTTTA GCAAAACTCG CTAATGCTCC TTTTATCAAA
GTTGAAGCAA CTAAATTTAC AGAAGTAGGG TATGTTGGTA AAGAGGTCGA ATCTATCGTT
CGTGATTTAG TCGATGTAGC CATTAAACTG ACTCGCGAAG AAGAAATGGC AAAGGTTGCC
CATAAGGCAG AAGATTTAGC TGAGGATAGG ATCTTAGATA TCCTTATTCC ACCTGCTAAA
ACAGGCAATG ATTGGGAAAC TGTAAAAACA GAAGATAGTG CGACAAGGCA GTCTTTCCGT
AAAAAACTGC GTGAAGGTAA ATTGGATGAT AAAGAGGTTG AGATAGATCT CCCTGCTCCA
CAAATAGGTG TGGAAATAAT GGCTCCTCCC GGCATGGAAG AAATGACTAA TCAATTGCAG
GGCATGTTTC AAAGTATGTC AGGTAAAGAT AAAACTAAAA AACGCAAAAT GAAAATAAAA
GAGGCGTTGA AAGTACTGAT CGAATCGGAA GCTGCAAAAT TAGTGAATGA AGAAGACATT
AAAGAAAAAG CACTCTTTTC AGCAGAAAAT AACGGTATTA TATTTATCGA CGAAATAGAT
AAAATTTGTA AGCGTGGTGA TAGTGCCGGT CCTGACGTAT CAAGAGAAGG TGTACAGCGT
GATTTATTAC CTTTAATTGA AGGTTCTACC GTCAGCACTA AGCATGGGAT GGTGAAAACT
GACCATATGT TATTTATTGC ATCGGGTGCA TTTCAAGTTG CTAAACCCTC AGATCTTATT
CCCGAATTAC AGGGCCGCTT ACCAATTAGG GTTGAGTTAG AAGCACTGAC AGAAGAAGAT
CTGGCAAAAA TATTAACTGA GCCTAAAGCT TCCTTAAGTG AACAGTATAA AGCGCTGTTA
GCAACCGAAG GTATAACGCT TCAATTTAGC AAAGATGGTA TAGATAAAAT TGCTAAATCT
GCCTGGCATG TGAATGAAAC CACCGAAAAT ATAGGTGCAC GTCGTTTACA CACATTAATG
GAACGCATTC TTGATGAACT TTCCTATGAA GCTTCAGAAC GGAAAGGTGA ATCAATTACT
ATTGATGAAA ATTACGTTGC TAATACGTTA GATGATTTGC TTGAAAATGA AGATTTAAGC
CGATATATTT TATAA
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| Protein sequence | MSNMTPKEIK HELDRHIIGQ DNAKRAVAIA LRNRWRRMQL DKEMRQEVTP KNILMIGPTG
VGKTEIARRL AKLANAPFIK VEATKFTEVG YVGKEVESIV RDLVDVAIKL TREEEMAKVA
HKAEDLAEDR ILDILIPPAK TGNDWETVKT EDSATRQSFR KKLREGKLDD KEVEIDLPAP
QIGVEIMAPP GMEEMTNQLQ GMFQSMSGKD KTKKRKMKIK EALKVLIESE AAKLVNEEDI
KEKALFSAEN NGIIFIDEID KICKRGDSAG PDVSREGVQR DLLPLIEGST VSTKHGMVKT
DHMLFIASGA FQVAKPSDLI PELQGRLPIR VELEALTEED LAKILTEPKA SLSEQYKALL
ATEGITLQFS KDGIDKIAKS AWHVNETTEN IGARRLHTLM ERILDELSYE ASERKGESIT
IDENYVANTL DDLLENEDLS RYIL
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