Gene Mkms_5442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5442 
Symbol 
ID4613126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp5676970 
End bp5677656 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content66% 
IMG OID639795137 
ProductTetR family transcriptional regulator 
Protein accessionYP_941418 
Protein GI119871466 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.385516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAGAG CGCCGTCGCA AGGGGGCCGC CCGCGCCGCA GTGGCATCGT CGCCGAGGAT 
CCGCGCGGAG ACATTCTCAA GGCCGCCGCA GAGTTGTTCG CGGCGAACGG ATTCGGATCC
ACCCGCATGG AGGCGATCGC GCAGCGGGCA GGGCTGGGAC AGTCGTCGCT CTACTACTGG
TTCCGGTCCA AAGACGCGAT CCTGCGAGGC ATCATGAACC AGAACCGGGT GTCGCTGGAG
GCAGCGCGGG CCTTGACCGA CCGCGATGAA TCAGCGGCGG TGCGGCTCTA CATCGTGCTG
TACCAGGATG TGGTCCAGAT GTGCACTGCA CCGCTGAACT TCTACGACCT GGAAGAGGCG
GCGAAGAAGC AGCCGGACGT CTTCAGCGAC TTCCAGGGTG ACTACGAAGA GTTGGCGGTG
CGACTCCGCA CCATCATCGA ATCAGGGGTC AGATCGGGCG AGTTCATCGA CGTCTCTCCC
GAGGAGTTCG CGCGCACGGC GCTGTGCCTG AACGAGGGAA GCCAGTACCG CTACCACGCG
ACCGGTCAGA GCCGCGAGGA CCTGCACCTG TTCGCCGACG CCGCAGCGAG AACGTCGCTG
CGGGCGGTGA TGGCCGACGT CGACCAGTTG GCCGGTGTGC AGGAAGCCGC CCGCGACGGA
ATCGCCGGGT TCAGCAGTAG CCCGTAG
 
Protein sequence
MTRAPSQGGR PRRSGIVAED PRGDILKAAA ELFAANGFGS TRMEAIAQRA GLGQSSLYYW 
FRSKDAILRG IMNQNRVSLE AARALTDRDE SAAVRLYIVL YQDVVQMCTA PLNFYDLEEA
AKKQPDVFSD FQGDYEELAV RLRTIIESGV RSGEFIDVSP EEFARTALCL NEGSQYRYHA
TGQSREDLHL FADAAARTSL RAVMADVDQL AGVQEAARDG IAGFSSSP