Gene Mkms_5398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5398 
Symbol 
ID4613082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp5631940 
End bp5633700 
Gene Length1761 bp 
Protein Length586 aa 
Translation table11 
GC content69% 
IMG OID639795093 
Productamidohydrolase 3 
Protein accessionYP_941374 
Protein GI119871422 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3653] N-acyl-D-aspartate/D-glutamate deacylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.32221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACC TCAAGATCGT CGGAGGAACC GTGGTCGACG GCACCGGCGC CGACCGGTTC 
CGCGCCGACG TGGGCGTCAA GGACGGAAAG ATCGTCGAGG TGCGCCGGGT GCCGCCGGGA
GGCGACGGTC TGGCGGGCGA TGCCGCGGTG ACGCTCGACG CCACCGAACG GATCGTCGCG
CCGGGCTTCG TGGACATCCA TACCCACTAT GACGGTCAGG TCAGCTGGGA CAGTCTGTTG
GAACCGTCCA GTTGCCACGG CGTGACCACG GTGGTCACCG GCAACTGCGG GGTGGGGTTC
GCGCCGGTCC GGCCGGGCAG CGAGGAATGG CTGATCAAAC TGATGGAGGG TGTCGAGGAC
ATCCCGGGAT CCGCGCTGAC CGAGGGCATC TCGTGGGGTT GGGAGAGCTA TCCCGAGTAT
CTGGACGTGA TCGGGTCGCA GCACTTCGCG GTCGACGTCG GCAGTCAGAT CGCGCACGGT
TCGGTGCGCG CCTACGCGAT GGGCGAGCGC GGCGCCCGCA ACGAGCCGGC CACACCCGAG
GACATCGCGG CGATGGCCCA CCTCGTGCGC GAGTCGATCG AGGCCGGCGC GCTGGGGTTC
TCCACCTCCC GGACCATCGC CCACCGGGCC ATGGACGGGG AACCCGTGCC CGGCACCTTC
GCCGCCGAGG ACGAACTGTT CGGTCTCGGC CGCGCCATGG CGGCCGGCGG CCGCGCGGTG
TTCGAACTCG CTCCGCAGGG TGCCGCGGGC GAGGACATCG TCGCGCCGAA GCGAGAACTG
GAGTGGATGC GACGCCTCGG CGCCGAGATC GAACGCCCGT TGTCGTTCGC GTTGATCCAG
GTCGACGCCG ACCCGAACCT GTGGCGCGAA CAGCTCGAGA TCTCGGCCGA CGCCCACGCC
GACGGCGCGA TGCTCTACCC GCAGATCGCC GCCCGGCCAT TCGGCATGCT GCTCGGCTTC
CCCGGCCATC ACGCCTTCAC CCACCGTCCG ACCTACCGCG CGCTCAAGTC GGAACTGCCG
CGTGAGGAGT TGGCAGAACG GCTCGCCGAC CCGGCGGTGA AGGCGGCGAT CCTCGGCGAA
TCCGATCTGC CGGTGGACAC CACCAGACAG TTCGACGGCA TGTTCGCCCT GGTTCAGCAT
TCACTGCATC GCATCTACGC ACTCGGTGAC CCGCCCGACT ACGAACCGAC GCCGGACAGG
ACCGTCGCGT CGATCGCCGC GGACCGCGGC GAGGACCCGT TGGCGACGCT GTACGACCTC
ATGCTCGAAG ACGGTGCGGG CTCGATGCTG ATGTTGCCGT TCTTCAACTA CGCCGACGGC
AACCACGACG CGATCCACGA GATGCTCACC CACCCCGCGG GTGTGTTGGG TCTGTCCGAC
GGCGGGGCGC ACTGCAACCT GATCTGCGAC GCCTCCTATC CCACCTATCT GGTCACCCAC
TGGGCCCGCG ACCGCCACCG CGGTCGCAAA TTGAGCCTCG AGTACGTCTT GCGTAAGCAA
TGCCGGGATA CGGCAACACT TTTCGGGCTC ACCGACCGCG GCACCATCGA GGTCGGCAAA
AGGGCCGACC TCAACGTGAT CGATTTCGAC GCGCTGACCC TGCACCCGGC CCGGATGGCC
TATGACCTTC CCGCGGGCGG GAATCGGCTG GTGCAGGGGG CCAGCGGTTA TGACGCGACG
GTCGTCAACG GCACCGTCAC CCGCCGCTTC GGCCGCGACA CGGGTGCGCG GCCCGGCCGG
TTGGTGCGCG GCGCCCGCTG A
 
Protein sequence
MFDLKIVGGT VVDGTGADRF RADVGVKDGK IVEVRRVPPG GDGLAGDAAV TLDATERIVA 
PGFVDIHTHY DGQVSWDSLL EPSSCHGVTT VVTGNCGVGF APVRPGSEEW LIKLMEGVED
IPGSALTEGI SWGWESYPEY LDVIGSQHFA VDVGSQIAHG SVRAYAMGER GARNEPATPE
DIAAMAHLVR ESIEAGALGF STSRTIAHRA MDGEPVPGTF AAEDELFGLG RAMAAGGRAV
FELAPQGAAG EDIVAPKREL EWMRRLGAEI ERPLSFALIQ VDADPNLWRE QLEISADAHA
DGAMLYPQIA ARPFGMLLGF PGHHAFTHRP TYRALKSELP REELAERLAD PAVKAAILGE
SDLPVDTTRQ FDGMFALVQH SLHRIYALGD PPDYEPTPDR TVASIAADRG EDPLATLYDL
MLEDGAGSML MLPFFNYADG NHDAIHEMLT HPAGVLGLSD GGAHCNLICD ASYPTYLVTH
WARDRHRGRK LSLEYVLRKQ CRDTATLFGL TDRGTIEVGK RADLNVIDFD ALTLHPARMA
YDLPAGGNRL VQGASGYDAT VVNGTVTRRF GRDTGARPGR LVRGAR