Gene Mkms_5333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5333 
Symbol 
ID4613017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp5570469 
End bp5571746 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content69% 
IMG OID639795028 
ProductBcr/CflA subfamily drug resistance transporter 
Protein accessionYP_941309 
Protein GI119871357 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.601093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.346965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGA AGATCGCGGC GGTCGCCTCG CCGCCGTCGG CCGTGCTGAT CGCGGTTCTG 
GCGCTGCTCA ACGCGGTGAC GCCGTTCTCG ATCGACATGT ACCTGTCGGC GTTCCCCGAG
ATGGCGTCCG AATTCGGGGT ATCGCCGTCG ACGATCCAGC TCTCGCTCAC GACGTTCTTG
ATCGGGTTGG CGGTCGGTCA GCTGATCATC GGAACGCTGT CCGACCGCTA CGGCCGGCGG
CGGCCTCTCA TCATCGGCAC CGTGGCCTGC GTCGCGGTCA GCGTGGCGTG CGCAGTGGCC
CCGTCGATTG CGCTGCTGAT CGGCCTGCGG TTCGCGCAGG GATTCTGCGG TGCGGCGGGT
GTGGTGATCT CCCGGGCCGT GATCGCCGAC CGCTCCCGCG GCTCTCGCGC CGCGCGGCTG
TTCGCGGTGA TGATGCTCAT CGGCGTTCTC GCGCCGATCA CCGCCCCGAT CCTCGGCGGC
GTCATCGTCA CCGGATTCGG CTGGCGCGCC GTCTTCCTCG CGCTGGCGGT ACTGAACCTG
GCGACCCTGC TGGGCGTCGT GCTGACCGTG CGGGAATCCC TGTCCGAAGA GCATCGGCGG
CCGGGCGGTC TCAAGGCGTT GGGGGTCAGT GCCCGGACGG TGCTGGGGAA CCGCCACTAC
CTGGGCTACA CGCTGGTGAT GGCGTTTGCC GCAGCCGCGA TGTTCGGCTA CATCTCGGCG
TCGCCGTTCG TCGTCCAGAA CATTCTGGGG TTCTCACCCG CGGCGTACTC GGTGACGTTC
GGATCGTGTG CGCTCGCCGT CGGCGCGGGC AGCCTGATCT CCGCGCGCCT GGTGCGGACC
GTCGCCCCGC GCCGGGTGCT GATGGGCGGC GTCACGGCAC TGCTGGTGGT CGCGACGCTG
ATGTTGCTCA ACGTCACTGC CGGCCACGTG ATCGGTTGGG CCACCATCGC TTTGATGGCG
TGCTTCATGG GCAGCATCGG ATTCGTCTAC GCCAACGCCA CCGCGCTGGC CCTCGGCGAG
GTACCGCGCG CGGCGGGAAC CGGATCGGCC GTTCTGGGTT TCCTCCAGTA CGGCATGGGT
GCGATCACCC CGCCGCTGGT CGGGTTGGCG GGTCAGTCCA GCGCGGTGCC GATGGGTCTG
GTGATGTTCG GCGCCGCGAC GCTGGCGGCC CTGTCGATGT TCGTGCTGAC CCGCGGGCAT
GTGCCGTTCG GGGATGAGGA CGACGACGCC GGCGACGCGC CGGTCACTGT GTCAGCAGGT
GGCACCACGA GTCGGTGA
 
Protein sequence
MSQKIAAVAS PPSAVLIAVL ALLNAVTPFS IDMYLSAFPE MASEFGVSPS TIQLSLTTFL 
IGLAVGQLII GTLSDRYGRR RPLIIGTVAC VAVSVACAVA PSIALLIGLR FAQGFCGAAG
VVISRAVIAD RSRGSRAARL FAVMMLIGVL APITAPILGG VIVTGFGWRA VFLALAVLNL
ATLLGVVLTV RESLSEEHRR PGGLKALGVS ARTVLGNRHY LGYTLVMAFA AAAMFGYISA
SPFVVQNILG FSPAAYSVTF GSCALAVGAG SLISARLVRT VAPRRVLMGG VTALLVVATL
MLLNVTAGHV IGWATIALMA CFMGSIGFVY ANATALALGE VPRAAGTGSA VLGFLQYGMG
AITPPLVGLA GQSSAVPMGL VMFGAATLAA LSMFVLTRGH VPFGDEDDDA GDAPVTVSAG
GTTSR