| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_5330 |
|---|
| Symbol | |
|---|
| ID | 4613014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 5565496 |
|---|
| End bp | 5567622 |
|---|
| Gene Length | 2127 bp |
|---|
| Protein Length | 708 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639795026 |
|---|
| Product | 5-oxoprolinase (ATP-hydrolyzing) |
|---|
| Protein accession | YP_941307 |
|---|
| Protein GI | 119871355 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.288616 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACACTC TCACCGACAC TCCCGTCGAC GTGGATGTCA TCACCTACGA GGTGGTCCGC
AACCGCCTCA CCGCCATCGT CGCCCAGCAG TCGGCGGTGC TCAAGAACGT CTCCGGCTCA
CCGCTGGTGA CCGAGGCCAA CGACTGCAAC ACCGGCGTCT ACCTGGCCGG CGGTGAGGTC
GTTGCGATGG GACCGCACAA CCTCTTTCAC TCCGGTTCGA TGGAGACGGT GGTGAACCAC
ATCATCGCCG ACTGCACCGA CACCGTCGGC ATCGAGGAAG GAGACGTCTT CATCACCAAC
GACCCCTACA AGGGCGTGTT GCACATGCCG GACGTCACCA TGATCGAGCC GGTGTTCCAC
GAAGGTGTCC GGATCGGATG GGTCGGGACG TGTGCGCATG TGCTCGACAT CGGCGGGATG
ACCCCGTCGA GTTGGTCGCC GGCCGCGCGG GAGGTGTATC AGGAGGGCCT GATCCTGCCG
CCCACGAAGA TCATCTCCGG TGGCCGGACC CGCCACGACG TGTGGAACCT GATCCTCGCG
GCATCCCGGC TGCCCGCCAA CCTCGGGCTC GACCTCAAGG CGATGATCGC CGCGAACAAC
CATGCGCGAC AGGGCATGCT GCGCCTAGTC GACCGCTACG GCGCCGACGT CGTCACCACG
GTGATGACGA CGATGCTCGA CCGCTCCGAA GCCCAGGTGC GCGAGCGGTT GCTCGCTGTC
CCGGACGGAA CCACCCGGGC GCGTACGTAT TTCGACCACG ACGGGCACAA GTCCACGCTC
GCGCGGGTCG AGGTGGAGCT CCGCAAGGAC GGCGACCGGC TGGTGTTCGA CTACGGCCGC
ACCGCCGAAC AGCTCCCGGG GTTCTTCAAC TGCACGATGT CCGGTCTGCG CGGCGGCGTG
TTCTCGGCGA TCCTGCCGGT GCTGGCCCAC GACATCCCGT GGAACAGCGG CGTCATGCGG
GCCATCGAGG TGACCGCACC CGAGGGGACC ATCGTCAACG CCAGGCACCC GGCGCCGTGC
GGTGCCTCGA CCACGGGCGC CACCACGATC GTGGAGAGCA CGGCGGGCAG CGCGTTGTCG
ACACTGGTCA GCGCGCACGA CGAATTACGT GGTGAGGCAA GGGCAGTCAC CACGGGCGGG
CTGATGGTCT TCCACATCGC CGGCCGCAAC CAGTACGGCG AACCGTACGG CGGCGCGATG
ACCGAGGTGC TGGCCGGGGG CGCCGGTGCC AACGTCAACC GCAACGGAGT CGACTACCGC
GGACCCAACG AGATCCTCAC CGGACAGTTC AACAACGTCG AGGGCGAGGA GGCCGTCTTC
CCGCTGCTGT ACCTGAACCG GTCGGCCAAC ACCGACGGTG GGGGAGCGGG CCGCCATCAC
GGCGGTGTGT CGGTGAGTTC GTCGTTCGTA CTGCACGACA CCGATGCGCT GCACGGGGTG
ATGGCGGGCC ACAGCATGTC GATGCCCAAC TCGCTCGGCC TTCACGGCGG GCTACCGGGA
TCGACGCATC AGGTGACGAT CGTGCGCGGG GGTGAGCCCG TGGTCTACAC CGGTTCTCCC
GGGGAGATCC ACCTTGCAGC AGGCGATGTC GTCGACTGGA GCTTCCACGG CGGGGGCGGC
TGGGGTGACC CGCTCGACGC CGACCCGGAC GAGGTGCTGG CAGACGTCAC GGCCGGCCGG
ATCTCCACCG AGAGCGCGTC GCGGCTCTAC GGCGTGGTCC TGACGGCAGG GGCGGTGGAC
CGTGAGGAGA CCACCGCGCG CCGGAACCGG GAACGCGCCC GTCGTCGACT GTGGGCCCGG
CACAGGGTGT TCGGTGCGCG GCAGCTCGAC ATGGTCGGTG ACGCGCGCCG GATCGGTGAC
CGTCTCGTGC TGACGCACGA CGGTGTGTCG GCGGTGTACG CGTGCGACTG CGGGAACGTG
ATCGCCCCTG CCGACGAGAA CTGGAAGGAC TACGCGGCGC ATTCCCGGTT GAGCGAACAC
GATCTGGGAC CGAAGGTCCG GTTGCATCCG GGTCTGCGCG CCGACGCGTA TGCGTGCGCG
GGATGCGGCA CGCTGCTGGC GGTCGAGATC CGGGCACACG AGGACGAACC GCTGCGCGAT
CTGGAGTTGG CCGGGCAGAG CGGCTGA
|
|---|
| Protein sequence | MNTLTDTPVD VDVITYEVVR NRLTAIVAQQ SAVLKNVSGS PLVTEANDCN TGVYLAGGEV
VAMGPHNLFH SGSMETVVNH IIADCTDTVG IEEGDVFITN DPYKGVLHMP DVTMIEPVFH
EGVRIGWVGT CAHVLDIGGM TPSSWSPAAR EVYQEGLILP PTKIISGGRT RHDVWNLILA
ASRLPANLGL DLKAMIAANN HARQGMLRLV DRYGADVVTT VMTTMLDRSE AQVRERLLAV
PDGTTRARTY FDHDGHKSTL ARVEVELRKD GDRLVFDYGR TAEQLPGFFN CTMSGLRGGV
FSAILPVLAH DIPWNSGVMR AIEVTAPEGT IVNARHPAPC GASTTGATTI VESTAGSALS
TLVSAHDELR GEARAVTTGG LMVFHIAGRN QYGEPYGGAM TEVLAGGAGA NVNRNGVDYR
GPNEILTGQF NNVEGEEAVF PLLYLNRSAN TDGGGAGRHH GGVSVSSSFV LHDTDALHGV
MAGHSMSMPN SLGLHGGLPG STHQVTIVRG GEPVVYTGSP GEIHLAAGDV VDWSFHGGGG
WGDPLDADPD EVLADVTAGR ISTESASRLY GVVLTAGAVD REETTARRNR ERARRRLWAR
HRVFGARQLD MVGDARRIGD RLVLTHDGVS AVYACDCGNV IAPADENWKD YAAHSRLSEH
DLGPKVRLHP GLRADAYACA GCGTLLAVEI RAHEDEPLRD LELAGQSG
|
|---|
| |