Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_5308 |
Symbol | |
ID | 4612992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | + |
Start bp | 5545101 |
End bp | 5547686 |
Gene Length | 2586 bp |
Protein Length | 861 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639795005 |
Product | formate dehydrogenase |
Protein accession | YP_941286 |
Protein GI | 119871334 |
COG category | [R] General function prediction only |
COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.418096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.849616 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGG CACATCCGGT CGGATTCCAG TGGGTGGTCG AGGCGAAGGC GCGCGGCACC GACGTGGTGC ACATCGACCC GCGGTTCACC CGCACCAGCG CACTGGCCGA CCGGTACGTA TCGCTGCGCG CCGGTAGCGA TATCGCCCTC CTCGGCGGGG TGATCAACTA CATCCTGAGC AACGAGCTGG ACTTCCGGGA GTACGTGACC GCGTACACCA ACGCATCGTT CATCGTCGAC GAACGGTTCA GCGACGCCGA GGATCTCGAC GGTCTGTTCT CCGGCTACGA CGACGCGACC GCCTCCTACG ATCCGTCGAC GTGGCAGTAC CAGACCACCG ATCCCGAGGA GGGCGGCGCC GAGGCCAAGG AGCAGAGCTC GGGCGACCGC TCCGGGTCCG GCGGTCCGCC GGTCGAGGGC GGTGCGGGTG ACATCCCCAG GGACCCGACG CTGCAGGACC CGCGCTGCGT CTACCAGATC CTCAAACGGC ACTACGCCCG CTACACCCCG GAGATGGTCG AGCGGGTGTG CGGGGTGCCC GCCGAACAGT TCCTCGAGGT GGCCCGCAAG TGGGCCGAGA ACTCCGGGCG GGAGCGGACC GCCGCATTGG TCTACAGCGT CGGGTGGACC CAGCACACGA TGGGCGCGCA GTTCATCCGC GCCGGCGCGA TCATCCAGCT GCTGCTCGGC AACATCGGCC GCCCCGGCGG CGGGGTGTTC GCACTGCGCG GCCACGCCAG CATCCAGGGC TCGACCGACG TGCCGACGCT GTTCAACCTG CTGCCCGGCT ACCTGGCGAT GCCCCACGCG GGCCAGGAGA CGCTGGCCGA CTACCTCGAC GACATCAAGA GCCGCAACCA GAAGGGCTTC TGGTTCAACG CCGATGCGTA CATGGTGTCG CTGCTCAAGG AGTACTGGGG CGAGCACGCA CGGGCGGACA ACGACTTCTG CTTCGACTAC CTGCCGCGCA TCAGCGGCGA CCACGGCACC TACCGCACGG TGATGGACAT GGTCGACGGG AAGGTGTTCG GTTACTTCCT GCTCGGCCAG AACCCGGCGG TCGGGTCGGC GCACGGCCGT CTGCAGCGCC TGGGCATGGC CAACCTGGAC TGGTTGGTGG TCCGCGACCT CGTCGAGATC GAGAGCGCCA CCTTCTGGAA GTCGGGCCCC GAGGTCGAGA CGGGTGAGAT CACCCCGCAG ACGTGCCGGA CGGAGGTGTT CCTCTTCCCG GCCGCCTCGC ATGTGGAGAA GGCGGGCACG TTCACGCAGA CGCAACGGAT GCTGCAGTGG CGGGAGAAGG CCGTCGAGCC GCCGGGCGAC GCCCGCTCGG AACTGTGGTT CTTCTACCAC CTGGGCCGCA TCCTGCGGGA GAAGCTGGCC GGCTCCACCG ACGAGCGTAA CCGTCCGCTG CTCGAATTGT CCTGGGACTA CGTGATGGAC GGCGACGAAC CGTCGGGTGA GGACGTACTG CGGCGGATCA GCGGTGTCGA CCTCACGACC GGCCGCGCGG TGGACGACTA CATGTCGCTC AGGGCCGACG GCACCACCAT GTCCGGCTGC TGGATCTACA GCGGCGTGTA CGCCGACGAG GTCAACCAGG CGGCGCGCCG CAAACCGCAC GACCAGCAGG GGCCCTACGA GAACGAGTGG GGCTGGACGT GGCCGATGAA CCGCCGCGTC CTGTACAACC GGGCCTCGGC GGATCCGCAG GGCCGGCCGT GGAGTGAGCG CAAGAAGCTG GTGTGGTGGG ACACCGAGAA ACAGGAGTGG ACGGGGTACG ACGTCCCCGA CTTCGAGAAG CACAAGCCGC CGGACTACCG GCCCGCCCCG GGTGCGGTGG GCGTCGAGGC GCTGCACGGG GACGACCCGT TCATCATGCA GGCCGACGGT AAGGCATGGC TGTTCGCGCC GAACGGTCTC GCGGACGGTC CGCTACCCAC ACACTACGAA CCGCACGAAT CGCCGGTGCG CAACCCGCTG TACGCGCAGC AGGGCAATCC GGCTCGCAAA GTGTATGGAC GAGCGGACAA TCCGTCGAAC CCGTCGCCGC CGGAACTGCA CGGTGAGGTG TTCCCGTACG TGTTCACCGC CGCGCGGCTG ACCGAACACC ACACCGCGGG CGGGATGAGC CGGCAGCTGC CCTATCTGGC CGAGCTGCAG CCCGGGCTGT TCGTGGAGGT CTCCCCGCAG CTGGCGGCCG AACGCGGGCT GACCCACATG GAATGGGCGC ACGTGATCAC CAGCCGGGCG GCGGTGGACG CCCGGGTGTT CGTCACCGAC CGGATGCGGC CGCTGCGGAT CGACGACCAT GTGGTGCACC AGATCTGGAT GCCCTACCAC TGGGGTAACG CCGGGCTGAT CGACGGTGAC GTGGTCAACG ACCTGCTCGG CGTGGTCGCC GACCCGAACG TGTTCATCCA GGAGAGCAAG GTCGCGACGT GTGACATCCA GCCGGGCAGG CGCCCCCGCG GACCGGCGCT GCTCGAGTAC ATCGCGATGT ACCGCGATCG GGCCCGCATC ACCGTCGACA CCGGGACCGA CCTCGACACG ACGAAACGGT CGACCGAACA CACCGAGGAA ACGTGA
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Protein sequence | MAEAHPVGFQ WVVEAKARGT DVVHIDPRFT RTSALADRYV SLRAGSDIAL LGGVINYILS NELDFREYVT AYTNASFIVD ERFSDAEDLD GLFSGYDDAT ASYDPSTWQY QTTDPEEGGA EAKEQSSGDR SGSGGPPVEG GAGDIPRDPT LQDPRCVYQI LKRHYARYTP EMVERVCGVP AEQFLEVARK WAENSGRERT AALVYSVGWT QHTMGAQFIR AGAIIQLLLG NIGRPGGGVF ALRGHASIQG STDVPTLFNL LPGYLAMPHA GQETLADYLD DIKSRNQKGF WFNADAYMVS LLKEYWGEHA RADNDFCFDY LPRISGDHGT YRTVMDMVDG KVFGYFLLGQ NPAVGSAHGR LQRLGMANLD WLVVRDLVEI ESATFWKSGP EVETGEITPQ TCRTEVFLFP AASHVEKAGT FTQTQRMLQW REKAVEPPGD ARSELWFFYH LGRILREKLA GSTDERNRPL LELSWDYVMD GDEPSGEDVL RRISGVDLTT GRAVDDYMSL RADGTTMSGC WIYSGVYADE VNQAARRKPH DQQGPYENEW GWTWPMNRRV LYNRASADPQ GRPWSERKKL VWWDTEKQEW TGYDVPDFEK HKPPDYRPAP GAVGVEALHG DDPFIMQADG KAWLFAPNGL ADGPLPTHYE PHESPVRNPL YAQQGNPARK VYGRADNPSN PSPPELHGEV FPYVFTAARL TEHHTAGGMS RQLPYLAELQ PGLFVEVSPQ LAAERGLTHM EWAHVITSRA AVDARVFVTD RMRPLRIDDH VVHQIWMPYH WGNAGLIDGD VVNDLLGVVA DPNVFIQESK VATCDIQPGR RPRGPALLEY IAMYRDRARI TVDTGTDLDT TKRSTEHTEE T
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