| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_5303 |
|---|
| Symbol | |
|---|
| ID | 4612987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 5539663 |
|---|
| End bp | 5540940 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639795000 |
|---|
| Product | selenocysteine synthase |
|---|
| Protein accession | YP_941281 |
|---|
| Protein GI | 119871329 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
|---|
| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC CGCGCCGGCG CGTGCCCCGC ACCGATGCCC TGCTCGCCGA CCCCCGGCTG
GCCGAGGCCG CGCGGGTACT GGGCCGCACG CTGGTGAAAA CGGTGATCGC CGACGCGCAG
CAGCGCGCCC GCGCCGGTGA CATCACGCCC GAACACGTCG CCGACCACGC GGTCGCCGCG
CTGCCGTCGG CGGCGGCGAG CCTGCGGCCG GTGATCAACG CGACCGGTGT GGTCGTCCAC
ACCAACCTCG GCCGCGCACC GCTGTCCCGG GCGGCCGTCG ACGCGGTGGT GACGGCCGGC
GGCGCGACCG ACGTCGAATT CGACCTCGCC ACCGGCCTGC GCGCCCGCCG GGGCCGCGGG
GCGTTGGCCG CACTGGCTCG GGCGGTGCCC ACCGCCGGTG GTGTACACGT GGTCAACAAC
AATGCCGCCG CGCTGCTGCT GGCCGCGATG ACGCTGGCGA GTGGGCGTGA AATCGTCATC
AGCCGAGGCG AACTCATCGA GATCGGCGAC GGCTTCCGCA TCCCCGAACT CCTCGAATCG
ACCGGCGCGC GCATCCGCGA GGTCGGCACC ACCAACCGCA CGCACCTGCG CGACTACGCC
GACGCCATCG GCCCGGACAC CGGGTTCGTA CTCAAGGTGC ACCCGTCGAA CTACCACGTC
ACCGGCTTCA CCAAGGCCGT GAGCATCACC GAGTTGGCCC GGCTCGACGC GCCGTTGGTC
GTCGACATCG GCTCGGGGCT GCTGACCCCG CACCCGGTCC TGCCCGACGA ACCGGATGCC
ACGACGGCGC TGCGCGCCGG CGCCGACCTC GTCACCGCCA GCGGGGACAA ACTGCTCGGC
GGCCCGCAGG CGGGGCTGCT GTTCGGCACC GCGGACCTGA TCGAACGGCT CCGCAGGCAT
CCCGCCGCCC GCGCCCTGCG GGTCGACAAG CTCACCCTCG CCGCGCTCGA GGCGACGCTG
GTGGGCCCGC CGACACCGGT CGAACGCGCG TTGACCGCCG ACCTCGCCGA TCTGCGGGAG
CGCGCGCAGC GCCTGGCCAC GCAGCTTCCG GACGCGCAGG CCGTCGACTG TGTCGCGGCG
GTCGGCGGCG GCGGCGCCCC CGAGGTCACC CTGCCCAGCG CAGGCGTCAG CCTGCCCGAA
TCGTTCGCCG CGGCGCTGCG CGCGGGAACA CCACCGGTGG TGGGCCGCGT CGAATCCGGC
CGCTGCGTCC TCGACCTGCG CACGGTCGAT CCGGAGGAGG ATGCGCGGCT GCTCGAGGCC
ATCAGCAGAT GTACGTAG
|
|---|
| Protein sequence | MTDPRRRVPR TDALLADPRL AEAARVLGRT LVKTVIADAQ QRARAGDITP EHVADHAVAA
LPSAAASLRP VINATGVVVH TNLGRAPLSR AAVDAVVTAG GATDVEFDLA TGLRARRGRG
ALAALARAVP TAGGVHVVNN NAAALLLAAM TLASGREIVI SRGELIEIGD GFRIPELLES
TGARIREVGT TNRTHLRDYA DAIGPDTGFV LKVHPSNYHV TGFTKAVSIT ELARLDAPLV
VDIGSGLLTP HPVLPDEPDA TTALRAGADL VTASGDKLLG GPQAGLLFGT ADLIERLRRH
PAARALRVDK LTLAALEATL VGPPTPVERA LTADLADLRE RAQRLATQLP DAQAVDCVAA
VGGGGAPEVT LPSAGVSLPE SFAAALRAGT PPVVGRVESG RCVLDLRTVD PEEDARLLEA
ISRCT
|
|---|
| |