Gene Mkms_5272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5272 
Symbol 
ID4612955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp5507441 
End bp5508724 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content70% 
IMG OID639794969 
Productbeta-lactamase 
Protein accessionYP_941251 
Protein GI119871299 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTACC CTTGCCCGGT GACCAGCACC GAGCAACAGG AGGGCCGCAT CAGGGTGCCG 
GCCGACCTCG ATGCGGTCAC CACGATCGGG GACGAGGACC ACGCCGGCGT GGACACCGCG
GCCGTCGAAC GCGTCTGGCA GGCGGCGCGG CACTGGTACT CCGCCGGGAT GCACCCCGCG
ATCCAGGTGT GCGTTCGCCG CCACGGGCGC GTCGTCCTCA ACCGGGCCAT CGGACACGGG
TGGGGCAACG GACCCGACGA CCCCGACGAC GCGGAGAAGA TCCCGGTCAC CCCGGATACC
CCGTTCTGCG TGTACAGCGC CGCCAAGGCG ATCACCACGA CCGTCGTGCA CATGCTGGCC
GAGCGCGGGT ACTTCTCACT CGACGATCGG GTCTGCGAAT ACCTGCCCAA CTACACCAGC
CACGGCAAGG ACCGCACCAC GATCCGCCAC GTCATGACCC ACAGCGCGGG CGTCCCCTTC
CCCACCGGAC AGCGGCCCAA CCTCAAGCGC ATGAACGACA GTGAGTACGC CCGCGAGATG
CTCGGCGACC TGCGGCCGCT GTACCGCCCG GGGCTGGTGC ACATTTACCA CGCCCTGACC
TGGGGTCCGC TGGTGCGCGA GATCGTCTCG GCGGCGACCG GCCGCGGTAT CCGCGAGATC
CTGGCCGAGG AGATCCTCGA ACCACTGGGC TTCCGCTGGA CCAACTTCGG GGTCGCCGAA
TCCGATGTCC CCCTCGTGGC GCCCAGCCAC GCCACCGGCA GACCGCTGCC CCCACCCATC
GCCGCGGCGT TCCGCACGGC CGTCGGCGGC ACCCTGCACC AGATCATCCC GTTCACCAAC
ACACCGCTGT TCCTCACCGG GGTGGTGCCG TCGTCGAGCA CGGTGTCGAC CGCACAGGAG
CTGTCGCGGT TCGCCGAACT GTTGCGCCGC GGTGGTGAAC TCGACGGTGT CCGGGTTCTG
GCCCCCGAGA CGCTGTACCA GGCCACCCGT GAGTGCCGGC GACTGCGGCC GGACCTGGCC
ACCGGTCTGA TGCCGCTGCG CTGGGGAACC GGATACATGC TGGGCTCCAA GCGGTTCGGA
CCGTTCGGCC GGAACGCCCC CGCGGCGTTC GGCCACACCG GTCTGGTCGA CATCGCGGTC
TGGGCCGACC CCGCCCGCGG CCTGGCGGTG GGTGTGGTCA GCAGCGGCAA ACCCGGCAGG
CACCGCGAAG CCAACCGGTA TCCGGCCCTG CTCGACCGCA TCAACGCCGA AATGGCCCCG
AGGTCGAATG GGATAATCGG CTGA
 
Protein sequence
MAYPCPVTST EQQEGRIRVP ADLDAVTTIG DEDHAGVDTA AVERVWQAAR HWYSAGMHPA 
IQVCVRRHGR VVLNRAIGHG WGNGPDDPDD AEKIPVTPDT PFCVYSAAKA ITTTVVHMLA
ERGYFSLDDR VCEYLPNYTS HGKDRTTIRH VMTHSAGVPF PTGQRPNLKR MNDSEYAREM
LGDLRPLYRP GLVHIYHALT WGPLVREIVS AATGRGIREI LAEEILEPLG FRWTNFGVAE
SDVPLVAPSH ATGRPLPPPI AAAFRTAVGG TLHQIIPFTN TPLFLTGVVP SSSTVSTAQE
LSRFAELLRR GGELDGVRVL APETLYQATR ECRRLRPDLA TGLMPLRWGT GYMLGSKRFG
PFGRNAPAAF GHTGLVDIAV WADPARGLAV GVVSSGKPGR HREANRYPAL LDRINAEMAP
RSNGIIG