| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_5270 |
|---|
| Symbol | |
|---|
| ID | 4612953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 5505543 |
|---|
| End bp | 5506898 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639794967 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_941249 |
|---|
| Protein GI | 119871297 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCCCG AAACGTCATC GGAAGCGACT GAACAGGTGC AGGACGAGCC GGCGACCGGC
GGCAAGCTCA AACGCAAGAT CACCGGGCCG TTGCTGTTCC TGTTCATCCT CGGTGACGTG
CTCGGCGCGG GCATCTACGC GCTGATGGGG GTGCTGGCGC AGGACGTCGG CGGCGTGCTG
TGGGCGCCGC TGCTGGTTGC GTTGCTGCTG GCGCTGCTCA CGGCGGGCTC GTATGCCGAA
CTGGTCACCA AGTATCCGAG GGCCGGCGGT GCCGCCGTCT TCGCCGAGCG GGCGTTCAAA
CGGCCGGTGG TGTCGTTCCT CGTCGGCTTC AGCATGCTGG CCGCCGGCGT CACCAGCGCC
GCCGGGCTGG CGCTGGCCTT CGCGGGGGAC TACCTGTCGA CGTTCATCGA CGTACCGGCG
ATCCCCGCCG CGATGGTGTT CCTCGGGCTC GTGGCGGCCC TGAACGCGCG CGGCATCAAC
GAATCGGTCA AGAGCAACGT GGTGATGACC GTCATCGAGT TGAGCGGTCT GCTGATCGTG
ATCGTCGCCG TGGCGATGAT GGTCGGCGGC GGACGTGGTG AGGTGGGACG GGTCGTCGAG
TTCCCGGACG GCGCCACGCC GGCGCTGGCG ATCCTGGCCG GAGCGATCGT GGCCTACTAC
TCGTTCGTCG GGTTCGAGAC GTCGGCCAAT GTCGCCGAGG AGATCCGGAA TCCGAGCAAG
GTGTATCCGA CCGCGCTGTT CGGCGCCCTG ATCACAGCGG GTGTGGTCTA TGCGCTGGTC
GGTGTCGCCA GCGCCGTCGC ACTGCCCGCC GACCAGCTCT CCGAATCGTC GGGCCCGTTG
CTCGACGTGG TCTCGGCGGC CGGTGTCGGC GTGCCGGACT GGTTGTTCAG CGCCATCGCG
CTGGTCGCGG TGGCCAACGG CGCGCTGTTG ACGATGATCA TGTCGAGCCG GCTGACCTAC
GGAATGGCCG AACACGGGCT TCTTCCCTCG GTGCTGAGCC GGGTGCTGCC CCAGCGCCGG
ACCCCGTGGG TGGCGATCGT CGCGACCACC GTGGTGGCCA TGTGCCTGAC CCTGGTCGGT
GAATTGTCGA CGCTGGCCGA GACCGTGGTG CTGTTGTTGT TGTTCGTGTT CATCTCGACC
AACGTGGCCG TGCTGGTGCT GCGCCGCGAT CATGTCGGAC ACGACCACTT CCGCGTGTGG
ACCGCGGTAC CGGTGCTCGG CGTGGCGTCG TGTGTGCTGC TGATGACCCA GCAGACCGCC
AAGGTGTGGG CGTTCGCCGC GATCATGCTG GCGGTGGGCG CGGTTCTTTA CGGCCTGGCC
CGGATCGCCA CGAAACGCCA GCGCACCGCG GTCTGA
|
|---|
| Protein sequence | MSPETSSEAT EQVQDEPATG GKLKRKITGP LLFLFILGDV LGAGIYALMG VLAQDVGGVL
WAPLLVALLL ALLTAGSYAE LVTKYPRAGG AAVFAERAFK RPVVSFLVGF SMLAAGVTSA
AGLALAFAGD YLSTFIDVPA IPAAMVFLGL VAALNARGIN ESVKSNVVMT VIELSGLLIV
IVAVAMMVGG GRGEVGRVVE FPDGATPALA ILAGAIVAYY SFVGFETSAN VAEEIRNPSK
VYPTALFGAL ITAGVVYALV GVASAVALPA DQLSESSGPL LDVVSAAGVG VPDWLFSAIA
LVAVANGALL TMIMSSRLTY GMAEHGLLPS VLSRVLPQRR TPWVAIVATT VVAMCLTLVG
ELSTLAETVV LLLLFVFIST NVAVLVLRRD HVGHDHFRVW TAVPVLGVAS CVLLMTQQTA
KVWAFAAIML AVGAVLYGLA RIATKRQRTA V
|
|---|
| |