| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_5237 |
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| Symbol | |
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| ID | 4612920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. KMS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008705 |
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| Strand | - |
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| Start bp | 5477647 |
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| End bp | 5478516 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639794934 |
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| Product | rhomboid family protein |
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| Protein accession | YP_941216 |
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| Protein GI | 119871264 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00959103 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTATC CCCAGTACCC GCAGTCACCC GCCCAGGCGC CGACCTGCTA CCGGCACCCC
GACCGCCAGA CCTACGTGCA GTGCACCCGC TGCGGACGGT TCATCTGTCC GGAGTGCATG
CGGTCGGCCG CCGTCGGGCA CCAGTGCCCC GACTGCGTCG GCGAGGCGGC CCGGTCCGCG
CCGCAGGCCC GCGCCCCGTT CGGCGGTCGG CTGTCGGACT CCAAACCGGT CGTGACCTTC
GCCCTCATCG CGGTCAACGT GCTGGTGTTC CTGATGCAGA CGACGTCAGG GCAGTTGGAG
CGCGAATTCG TGCTCTGGAC GCCCGGCGTC GCCGACGGTG AGTGGTACCG CCTGGCCACG
TCCGCGTTCC TGCACTACGG GGCGATGCAC CTGTTGTTCA ACATGTGGGC GCTCTACGTC
GTCGGGCCGC CGCTGGAGAT GTGGCTGGGC CGGCTGCGCT TCGGGGCGCT CTATGCGCTC
AGCGCGCTGG GCGGGTCCGT GCTGGTCTAC CTGCTCTCAC CGATCAACGC CGCGACTGCG
GGCGCGTCCG GCGCGGTGTT CGGCCTGTTC GGCGCGATGT TCGTGGTGGC CCGCAAACTG
AACCTGGACA TCCGCGGAAT CGCGGCGATC ATCATCCTGA ACCTGGTGTT CACGTTCGTG
TACCCGCTGA TCAGCGGTCA GGGCATCAGC TGGCAGGGTC ACGTGGGCGG GTTGGTCACC
GGTGCGGCGA TCGCCGGCGT GTACGCCTAC GCGCCCGCCG GCCGCCGCAA CCTCGTGCAG
GGTGGCGTGA CCGCCGCGGT GCTGCTGTTG TTCGTGGTGC TGATCTGGTG GCGGACGGAG
GAGATCTTCG CGATGTTCGG CGTGCGCTGA
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| Protein sequence | MSYPQYPQSP AQAPTCYRHP DRQTYVQCTR CGRFICPECM RSAAVGHQCP DCVGEAARSA
PQARAPFGGR LSDSKPVVTF ALIAVNVLVF LMQTTSGQLE REFVLWTPGV ADGEWYRLAT
SAFLHYGAMH LLFNMWALYV VGPPLEMWLG RLRFGALYAL SALGGSVLVY LLSPINAATA
GASGAVFGLF GAMFVVARKL NLDIRGIAAI IILNLVFTFV YPLISGQGIS WQGHVGGLVT
GAAIAGVYAY APAGRRNLVQ GGVTAAVLLL FVVLIWWRTE EIFAMFGVR
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