Gene Mkms_5214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5214 
Symbol 
ID4612897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp5457403 
End bp5458179 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content66% 
IMG OID639794911 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_941193 
Protein GI119871241 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0756972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAGG TTGTGCGCGT AGTCCTGTGG CTGGTTTTCG CGCTGTTCTT CCTGTTCCCG 
CTCTACGCGA TGGCCGATTT CTCGACCCGC GACCTGATCA ACGGCGGCCG CACCCTGCAG
GCGTGGCAGA ACCTCGTCGC CGACCGGGCG CTGTACCAGG CCATCATCAT CTCCCTGCTG
CTCGCGGTGT TCACGGTGAT CGCGATGCTC GCCGTGCTGG TCCCGACGAT GATCTGGGTG
CGGCTGCGGG CGCCGTGGGC GCGGCGGCCC GTCGAATTCC TGTGCCTGCT GCCGCTGACC
ATCCCGGCAC TGGTGATCGT CGTCGGGTTG AAGAACGTCT ACCTGTGGGT GACGTACTTC
CTCGGGGAAT CCGCTCTCAC ACTGACATTC GTCTACGTCG TGCTGGTGCT GCCGTTCGCG
TACCGCTCGA TCGACGCGGC GCTGTCCGCC ATCGACCTGC AGACGCTCTC GGAGGCGGCC
CGTTCGCTGG GCGCCGGGTG GACCGCGACG ATCCTGCGGG TGGTGGTGCC CAACATCTGG
TCGGGCATCC TGTCGGCGGC GTTCATCTCG ATCGCCGTCG TCCTCGGTGA GTACACCATC
GCGTCGCTGA GCGGTTTCCA GACGCTGCAG GTGCAGATCG TCGCACTCGG CAAGACCGAC
GGACCGACCT CGGTCGCGGC GTCGCTGGCC GTGCTGCTGT TCGGATTCGC TCTGCTGCTG
GTGCTTTCGC TCGTCACCCG CGGCCGCCGT CGCCCCACCA CGCTAGGAGC CGCATGA
 
Protein sequence
MKKVVRVVLW LVFALFFLFP LYAMADFSTR DLINGGRTLQ AWQNLVADRA LYQAIIISLL 
LAVFTVIAML AVLVPTMIWV RLRAPWARRP VEFLCLLPLT IPALVIVVGL KNVYLWVTYF
LGESALTLTF VYVVLVLPFA YRSIDAALSA IDLQTLSEAA RSLGAGWTAT ILRVVVPNIW
SGILSAAFIS IAVVLGEYTI ASLSGFQTLQ VQIVALGKTD GPTSVAASLA VLLFGFALLL
VLSLVTRGRR RPTTLGAA