Gene Mkms_5162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5162 
Symbol 
ID4612845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp5410466 
End bp5411590 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content71% 
IMG OID639794859 
Productpolyprenyl synthetase 
Protein accessionYP_941141 
Protein GI119871189 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.18985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.559036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGTG TCGACGATCG GCTGCTCGCC GCAGCTTTGC GGCCAGCCCC AGCCCGGCTC 
ACGGCCGACT CCTTCGACAC CTGGCGCAGG GATGTACGCC GCGCGGCGAT CGATGCGGTG
ACCGAGTTCG TCACCGACCG GTGCGCCGAC GACCTGCGGC TCACCGGTGT CGACGTCACC
CTCGACGTGC TCTCCGACTT CGTCAGCGAC GGTAAGTGCC TGCGCTCGAC GTTCGCCTAC
CTCGGTTGGC TGGCCGGTGC CGCACCCGAC GACGCCGCCC TGCGCGCCGC GGCGAGTTTC
GACCTGCTGC ACGTGTTCGC ACTGCTGCAG GACGACGTGA TGGACGACTC ACCGCTGCGC
CGTGGCCGTC CGGCGGCGCA TGTGCGCTTC GCGCAGTGGC ACCGGGACAA CGGACTCAAC
GGATCCGCGG AGCGGTTCGG CGCCTCGGCG GCGGTGCTGC TCGGCGACCT CTGCCTGGTG
TGGGCGGGGC AGATGATGCG CGAGAGCGGT CTGGGTGACC GGGCACTGGC CCGGGCGTGG
CCCCGGTATG ACGCGATGCG CACGGAATTG GCGGTGGGCC AGTTCGCCGA TCTGGTCAAT
GATGCGGGCG GACGGCCGAC ACTGGAGGAC GTGCTCGACG TCGCACGCCG CAAATCCGGG
AACTACACGG TGCGCCGCCC CCTGGAGATC GGCGGTGCAC TGGCCGGCTG CCCGGACGCG
ACGCTGGGCT TGCTCGGCCG CTACGGCGCG GCCGTCGGTG AGGCGTTCCA GCTGCGCGAC
GACCTCCTCG GCATCTTCGG TGCCCCGACG GTGACCGGCA AACCCGCAGG CGGCGACCTG
TCCGAACACA AGGCCACCAG CGTGGTGGTC GCGGCGCACC GGCTGGCCGA ACCGTCGGTG
CGCAACCAAC TCACCGAGTT GATGTCGCGA CGCGACCTCG ACGCGGGTGA CATCACCCGC
TGGCAGCACC TCATCGCCGC GACCGGCGCC GTGCAGTGGA TCGAGCAGCT GATCGACCGG
CGGCTCTCCC ATGCGCTGGA GCGCATCCAC ACCAGCCCAC TCGACGACAC CGTCAGAACC
GCACTGGTCA ACATGGCCGC CGTATGCACC CGGCGGGCAG CGTGA
 
Protein sequence
MSGVDDRLLA AALRPAPARL TADSFDTWRR DVRRAAIDAV TEFVTDRCAD DLRLTGVDVT 
LDVLSDFVSD GKCLRSTFAY LGWLAGAAPD DAALRAAASF DLLHVFALLQ DDVMDDSPLR
RGRPAAHVRF AQWHRDNGLN GSAERFGASA AVLLGDLCLV WAGQMMRESG LGDRALARAW
PRYDAMRTEL AVGQFADLVN DAGGRPTLED VLDVARRKSG NYTVRRPLEI GGALAGCPDA
TLGLLGRYGA AVGEAFQLRD DLLGIFGAPT VTGKPAGGDL SEHKATSVVV AAHRLAEPSV
RNQLTELMSR RDLDAGDITR WQHLIAATGA VQWIEQLIDR RLSHALERIH TSPLDDTVRT
ALVNMAAVCT RRAA