| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_5122 |
|---|
| Symbol | |
|---|
| ID | 4612805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 5372671 |
|---|
| End bp | 5373618 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639794819 |
|---|
| Product | prephenate dehydratase |
|---|
| Protein accession | YP_941101 |
|---|
| Protein GI | 119871149 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0077] Prephenate dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.348107 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCGCA TCGCCTATCT CGGCCCTCAG GGGACGTTCA CCGAATCGGC GTTGCTGCAG
ATGATCTCCG GCGCGATGGT GCCCGGCGGG GATGCCGACG ACACCGCGGT GACCCCCGTG
CCGACCGACA GCACACCCGC CGGGCTCGAG GCGGTGCGAT CCGGCGCGGC CGACTACGCC
TGCGTCCCCA TCGAGAACTC CATCGAGGGC TCGGTGCTGC CCACACTCGA CAGCCTCGCG
GTCGGAGCGC CGCTGCAGAT CTTCGCCGAA CTCACCCTCG CCGTGTCGTT CAGCATCGTG
GTGCGCCCCG ATCACGACGG TGACGTCGGA ACCGTCGCCG CGTTCCCGGT GGCCGCCGCG
CAGGTGCGGC GCTGGCTGGC CGAACACCTA CCGGCCGCGC AACTCGTGCC GGCGCACTCC
AACGCCGCCG CGGCGGCCGA CGTGGCAGGC GGGCGTGCCG ACGCCGGAAT CAGCACGGCA
CTGGCCGCCG AACGCTACGG GCTGCGCAGC CTGGCCGCGG GTGTCGTCGA CGAACCGAAC
GCCCGCACCC GGTTCGTCCT CGTGGGGCGG CCCGCCCCGC CACCGGCCCG CACCGGCGCC
GACCGCACCT CGGTCGCCCT GCGCCTGCCG AACACCCCCG GTGCGCTGGT GGCGGCGATG
ACCGAACTGT CGATCCGCGA CATCGACCTC ACCCGCATCG AGTCCCGGCC CACCCGCACC
GAACTCGGCA CCTACGTGTT CTTCCTCGAC TGTGTCGGTC ATCTCGAAGA CGACGCCGTC
GCCGAGGCAC TCAAAGCGCT CCACCGTCGT TGTGAAGATG TGCGATATCT GGGTTCCTGG
CCGACTGGGA CGGCCGCCGG CGCGCCGCCG CCGAGCAGTG ACGAGGCGAC TCGCTGGCTG
ACACGACTCC GTGAAGGACT GCCGACACCA CCGGAGGGCG GCAGGTGA
|
|---|
| Protein sequence | MPRIAYLGPQ GTFTESALLQ MISGAMVPGG DADDTAVTPV PTDSTPAGLE AVRSGAADYA
CVPIENSIEG SVLPTLDSLA VGAPLQIFAE LTLAVSFSIV VRPDHDGDVG TVAAFPVAAA
QVRRWLAEHL PAAQLVPAHS NAAAAADVAG GRADAGISTA LAAERYGLRS LAAGVVDEPN
ARTRFVLVGR PAPPPARTGA DRTSVALRLP NTPGALVAAM TELSIRDIDL TRIESRPTRT
ELGTYVFFLD CVGHLEDDAV AEALKALHRR CEDVRYLGSW PTGTAAGAPP PSSDEATRWL
TRLREGLPTP PEGGR
|
|---|
| |