| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_5099 |
|---|
| Symbol | |
|---|
| ID | 4612782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 5347519 |
|---|
| End bp | 5349408 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639794796 |
|---|
| Product | long-chain-fatty-acid--CoA ligase |
|---|
| Protein accession | YP_941078 |
|---|
| Protein GI | 119871126 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.383876 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTCC ACAACCCGTT CATCAAGGAC GGCCTCATCA AGTTCCCCGA CAACGGGAAC
CTGGTGCGTC ACGTCGAGCG ATGGGCGAAG GTGCGTGGCG ACAAACTGGC GTACCGCTTC
ATCGACTTCT CCACCGAACG CGACGGGGTC GAGCGCGACC TCACCTGGGC CGACTTCGGC
GGCCGCAACC GCGCCGTCGG CGCCCGCCTG CAGCAGGTGA CCCAGCCCGG CGACCGCGTC
GCGATCCTGT GCCCGCAGAA CCTCGACTAC CTCGTCGCAT TCTTCGGCAC GCTGTACTCC
GGCCGCATCG CCGTGCCGCT GTTCGACCCG AACGAGCCCG GCCACGTCGG ACGCCTGCAC
GCCGTCCTCG ACGACTGCAC ACCGTCGGCG ATCCTGACCA CCACCGAGGC CGCCGAGGGT
GTGCGCAAGT TCTTCCGCAC CCGGCCGGCC AACCAGCGTC CCCGCGTCAT CGCCGTCGAC
GCGGTCCCCA ACGAGGTCGG TCAGACCTGG GAGCCCGTCG ACGTCCACCA GGAGACCATC
GCGTACCTGC AGTACACCTC CGGTTCCACG CGTATCCCGA CCGGTGTGCA GATCACCCAC
CTGAACCTGG CCACCAACGT GGTGCAGGTG ATCGAGGCGC TCGAGGGTGA GGAAGGCGAC
CGGGGTGTGT CCTGGCTGCC GTTCTTCCAC GACATGGGTC TGATCACGAT CATGATCTCG
CCGATGATCG GGCACTACAT CTCGTTCATG ACGCCCGCCG CGTTCGTCCG CCGCCCCGGC
CGCTGGATCC GCGAGATGGC CCGCAAGGAG GGCGAGACCG GCGGCGTCAT CTCCGTCGCG
CCGAACTTCG CGTTCGACCA CGCCGCCGCC CGCGGAGTGC CCCGCGAGGG CGAGCCGGCG
CTGGACCTGT CCAACGTCAA GGCGCTCCTC AACGGCAGTG AACCGATCTC GGCGGCGACG
GTCCGCAACT TCAACGAGGC GTTCGGGCCG TTCGGGTTCA AACCGCAGGC CATCAAACCG
TCCTACGGGC TGGCCGAGGC CACGCTGTTC GTGTCGACGA CCCCGGTCAA CGAATCGCCG
AAGATCGTCA CCGTCGACCG CGACGAACTG AACAGCCACC GCTTCGTCGA GGTGCCGCCG
GATTCGCCGA AGGCCGTCGC GCAGGCGTCG GCGGGCAAGG TCGGCGTCGC GGAATGGGCG
GTCATCGTCG ACCACGACAC CGCCACCGAA CTGCCCGACG GCCAGATCGG CGAGATCTGG
ATCTCCGGGC AGAACATGGG CACCGGCTAC TGGGGCAAGG AAGAGGAGAC CCAGGCGACA
TTCCGCAACA TCCTCAAGTC GCGGACGAAC CCGAGCCACG CCGAAGGCGC GCCCGACGAC
GCGATGTGGG TGCGCACCGG TGACCTCGGC GCCTTCCACG ACGGCGACCT CTACATCACC
GGCCGCGTCA AGGACCTGGT GATCATCGAC GGCCGCAACC ACTATCCGCA GGATCTCGAG
TACTCGGCGC AGGAGGCCAC CAAGGCGCTG CGCACGGGAT TCGTCGCGGC GTTCTCGGTG
CCGGCCAACC AGCTTCCCGA CGAGGTCTTC GACAACGCGC ACGCCGGTCT CAAGCGCGAC
CCCTCCGACA CCTCCGAACA GCTCGTCATC GTCGGTGAGC GGGCGCCCGG TGCCCACAAG
CTCGACATGG GCCCGATCGC CGACGACATC CGCGCCGCGA TCGCCGTGCG CCACGGCGTC
ACGGTGCGCG ACGTGCTGCT GACCCCGGCC GGAGCGATCC CGCGTACGTC GAGCGGCAAG
ATCGGCCGCC GGGCGTGCCG CTCGGCCTAC CTCGACGGAA GCCTCCGCAG CGGGAAGGTC
GCCAACGCCT TCCCCGACGA GACGGACTGA
|
|---|
| Protein sequence | MPFHNPFIKD GLIKFPDNGN LVRHVERWAK VRGDKLAYRF IDFSTERDGV ERDLTWADFG
GRNRAVGARL QQVTQPGDRV AILCPQNLDY LVAFFGTLYS GRIAVPLFDP NEPGHVGRLH
AVLDDCTPSA ILTTTEAAEG VRKFFRTRPA NQRPRVIAVD AVPNEVGQTW EPVDVHQETI
AYLQYTSGST RIPTGVQITH LNLATNVVQV IEALEGEEGD RGVSWLPFFH DMGLITIMIS
PMIGHYISFM TPAAFVRRPG RWIREMARKE GETGGVISVA PNFAFDHAAA RGVPREGEPA
LDLSNVKALL NGSEPISAAT VRNFNEAFGP FGFKPQAIKP SYGLAEATLF VSTTPVNESP
KIVTVDRDEL NSHRFVEVPP DSPKAVAQAS AGKVGVAEWA VIVDHDTATE LPDGQIGEIW
ISGQNMGTGY WGKEEETQAT FRNILKSRTN PSHAEGAPDD AMWVRTGDLG AFHDGDLYIT
GRVKDLVIID GRNHYPQDLE YSAQEATKAL RTGFVAAFSV PANQLPDEVF DNAHAGLKRD
PSDTSEQLVI VGERAPGAHK LDMGPIADDI RAAIAVRHGV TVRDVLLTPA GAIPRTSSGK
IGRRACRSAY LDGSLRSGKV ANAFPDETD
|
|---|
| |