Gene Mkms_5079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5079 
Symbol 
ID4612762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp5315015 
End bp5315836 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content65% 
IMG OID639794776 
ProductABC transporter related 
Protein accessionYP_941058 
Protein GI119871106 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.991153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGTTC CTCGTATCGA GACCCGTGAC GCATGGGTCG AGTTCCCGAT CTTCGATGCC 
AAGACCCGGT CGCTGAAGAA GGCGTTCCTC GGAAAGGCCG GCGGGGCCAT CGGGCGCAAC
GACTCGAACG TCGTCGTCAT CGAAGCCCTC CGCGACATCA CCATGTCGCT GGAACTCGGG
GACCGGGTCG GTCTGGTCGG CCACAACGGC GCAGGTAAAT CGACACTGCT GCGGTTGCTG
TCGGGCATCT ACGAGCCGAC CCGGGGGTCT GCCACCGTGA CGGGCCGGGT GGCGCCGGTG
TTCGACCTCG GCGTCGGGAT GGATCCGGAG ATCTCCGGCT ACGAGAACAT CATCATCCGC
GGACTGTTCC TCGGTCAGAC GCGTAAGCAG ATGCTGGCCA AGGTCGACGA GATCGCGGAG
TTCACCGAAC TCGGTGACTA CCTGTCGATG CCGCTGCGCA CGTACTCCAC CGGTATGCGG
GTGCGGTTGG CGATGGGTGT GGTCACCAGC ATCGACCCGG AGATCCTGCT GCTCGACGAG
GGTATCGGGG CGGTGGACGC CGACTTCCTC AAGAAGGCGC AGTCGCGACT GCAGAGCCTG
GTCGAACGGT CCGGGATCCT GGTGTTCGCC AGCCACTCCA ACGAATTCCT CGCCCGGTTG
TGCAAGACCG CGATGTGGAT CGACCACGGC ACCGTCAAGA TGACCGGCGG TATCGAGGAC
GTCGTGCGGG CCTACGAGGG TGAGGACGCC GCGCGGCATG TGCGAGAAGT GCTCGACGAA
CACCGCGGGG ACTGGTCAGC CACCGACGAG CCTTCCCGAT GA
 
Protein sequence
MAVPRIETRD AWVEFPIFDA KTRSLKKAFL GKAGGAIGRN DSNVVVIEAL RDITMSLELG 
DRVGLVGHNG AGKSTLLRLL SGIYEPTRGS ATVTGRVAPV FDLGVGMDPE ISGYENIIIR
GLFLGQTRKQ MLAKVDEIAE FTELGDYLSM PLRTYSTGMR VRLAMGVVTS IDPEILLLDE
GIGAVDADFL KKAQSRLQSL VERSGILVFA SHSNEFLARL CKTAMWIDHG TVKMTGGIED
VVRAYEGEDA ARHVREVLDE HRGDWSATDE PSR