Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_5059 |
Symbol | |
ID | 4612739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | + |
Start bp | 5297858 |
End bp | 5298601 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639794753 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_941038 |
Protein GI | 119871086 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGACC TGACCGACCG GGTGGTGCTG GTCACCGGCG GTAGCCGGGG GCTGGGCCGC GAGATCGCCT TCGGAGCCGC GCGCTGCGGG GCCGATGTGG TGATCGCCAG CCGGTCGCTC GAGACGTGCG AGGCGACCGC CGCCGAGATC GCCGAGGCGA CGGGCCGGAC CGCCATGCCC TACGAGGTCC ACGTGGGACG GTGGGATCAG CTCGACGGTC TGGTTTCCGC GGTGTACGAG CGGTTCGGCA AGCTCGACGT GCTGGTCAAC AACGCCGGTA TGTCACCGCT GTACGAGTCG CTGACGTCGG TGACCGAGAA GCTGTTCGAC GCGGTGTTCA ACCTGAACGT CAAGGGACCG TTCCGGTTGG CGGCGCTGAT CGGTGAGCGG ATGGTGGCCG ACGGCGGCGG GACGATCGTC AACGTCAGCT CCAGCGGATC GATCCGGCCC GATCCGCACA TGCTGCCCTA CGCCGCCGCC AAGGCCGGCC TCAACGCCAT GACCGAGGGG CTGGCGCAGG CCTACGGCCC GACGGTGCGC GTCAACACGC TGATGGCCGG GCCGTTCCTC ACCGATGTCA GCAAGGCGTG GGACTTCTCC GGTACCGAGA ATCCGTTCGG TCACATGGCG CTGAAGCGGG CCGGGGATCC GGCCGAGATC GTCGGCGCCG CACTGTTTCT CATGTCGAAT GCGTCGAGCT TCACCACCGG CGCCATCCTG CGCGCCGACG GCGGCATCCC CTGA
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Protein sequence | MFDLTDRVVL VTGGSRGLGR EIAFGAARCG ADVVIASRSL ETCEATAAEI AEATGRTAMP YEVHVGRWDQ LDGLVSAVYE RFGKLDVLVN NAGMSPLYES LTSVTEKLFD AVFNLNVKGP FRLAALIGER MVADGGGTIV NVSSSGSIRP DPHMLPYAAA KAGLNAMTEG LAQAYGPTVR VNTLMAGPFL TDVSKAWDFS GTENPFGHMA LKRAGDPAEI VGAALFLMSN ASSFTTGAIL RADGGIP
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