Gene Mkms_5059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5059 
Symbol 
ID4612739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp5297858 
End bp5298601 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content69% 
IMG OID639794753 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_941038 
Protein GI119871086 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACC TGACCGACCG GGTGGTGCTG GTCACCGGCG GTAGCCGGGG GCTGGGCCGC 
GAGATCGCCT TCGGAGCCGC GCGCTGCGGG GCCGATGTGG TGATCGCCAG CCGGTCGCTC
GAGACGTGCG AGGCGACCGC CGCCGAGATC GCCGAGGCGA CGGGCCGGAC CGCCATGCCC
TACGAGGTCC ACGTGGGACG GTGGGATCAG CTCGACGGTC TGGTTTCCGC GGTGTACGAG
CGGTTCGGCA AGCTCGACGT GCTGGTCAAC AACGCCGGTA TGTCACCGCT GTACGAGTCG
CTGACGTCGG TGACCGAGAA GCTGTTCGAC GCGGTGTTCA ACCTGAACGT CAAGGGACCG
TTCCGGTTGG CGGCGCTGAT CGGTGAGCGG ATGGTGGCCG ACGGCGGCGG GACGATCGTC
AACGTCAGCT CCAGCGGATC GATCCGGCCC GATCCGCACA TGCTGCCCTA CGCCGCCGCC
AAGGCCGGCC TCAACGCCAT GACCGAGGGG CTGGCGCAGG CCTACGGCCC GACGGTGCGC
GTCAACACGC TGATGGCCGG GCCGTTCCTC ACCGATGTCA GCAAGGCGTG GGACTTCTCC
GGTACCGAGA ATCCGTTCGG TCACATGGCG CTGAAGCGGG CCGGGGATCC GGCCGAGATC
GTCGGCGCCG CACTGTTTCT CATGTCGAAT GCGTCGAGCT TCACCACCGG CGCCATCCTG
CGCGCCGACG GCGGCATCCC CTGA
 
Protein sequence
MFDLTDRVVL VTGGSRGLGR EIAFGAARCG ADVVIASRSL ETCEATAAEI AEATGRTAMP 
YEVHVGRWDQ LDGLVSAVYE RFGKLDVLVN NAGMSPLYES LTSVTEKLFD AVFNLNVKGP
FRLAALIGER MVADGGGTIV NVSSSGSIRP DPHMLPYAAA KAGLNAMTEG LAQAYGPTVR
VNTLMAGPFL TDVSKAWDFS GTENPFGHMA LKRAGDPAEI VGAALFLMSN ASSFTTGAIL
RADGGIP