| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_5027 |
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| Symbol | ligC |
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| ID | 4612706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. KMS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008705 |
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| Strand | + |
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| Start bp | 5267034 |
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| End bp | 5268095 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639794720 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_941006 |
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| Protein GI | 119871054 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.792567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAACTTC CCGTTTCACC CCCGATTGCG CCGATGCTGT CGAAGGCGGT CACGGACATC
CCGCTCGGCG CGTCCTACGA ACCCAAGTGG GACGGGTTCC GGTCGATCGT GTTCCGCGAT
GGCGACGAGG TGGAACTCGG CAGCCGCAAC GAGCGGCCGA TGACCCGGTA CTTCCCCGAA
CTCGTCGAGG CGGCCCGCGC GGAGCTTCCG GCGCGGTGTG TGATCGACGG CGAGATCGTC
ATCGCCACCG CCGACGGACT GGACTTCGAG GCGCTGCAGT TGCGGTTGCA TCCGGCGGCG
TCGCGGGTGC GGATGCTGGC CGAGAAGACG CCGGCGTCGT TCATCGCGTT CGACCTGCTT
GCGCTGGGCG ACACCGACTA TACGTCGCGG CCGTTCGTCG AACGGCGGGC CGAACTTGAA
CGCGTGCTCA CCGGCGGCCA CACATTCCAC GTCACGCCGG CCACCGTCGA CGTCGACACG
GCACGGCGCT GGTTCCACGA ATTCGAGGGC GCCGGCCTCG ACGGGGTGAT CGCCAAACCG
CTCGACGGAC CGTATCTGCC GGACAAGCGG GTGATGTTCA AGGTCAAACA CCAGCGCACG
GCCGACTGCG TGGTCGCCGG GTACCGGCTG CACAAATCGG GCGACGACGC CATCGGGTCG
CTGCTGCTCG GTCTGTACAC CGACGACGGC GAGCTGGCGT CGGTGGGCGT GATCGGGGCG
TTTCCGATGG CGCGGCGGCG GGCCCTGTTC GCCGAGCTGC AGCCGCTGGT GGCCACCTTC
GACGAGCATC CGTGGAACTG GGCCGCCCAC GCCGATCCCG ACGTGGTGCG CCGCTACGGG
GGCGGGTCGC GCTGGAACGC GGGCAAGGAT CTGTCGTTCG TGCCGTTGCG GCCCGAACGG
GTGGTCGAGG TGCGGTACGA CCACATGGAG GGGCGGCGAT TCCGCCACAC CGCCCAGTTC
AACCGCTGGC GTCCCGACCG CGACCCGCGC TCGTGCACCT ACGCGCAACT CGAGCAGCCG
GTCACCTTCC GCCTCGGCGA CATCGTGCCG GGGCTCGGCT GA
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| Protein sequence | MQLPVSPPIA PMLSKAVTDI PLGASYEPKW DGFRSIVFRD GDEVELGSRN ERPMTRYFPE
LVEAARAELP ARCVIDGEIV IATADGLDFE ALQLRLHPAA SRVRMLAEKT PASFIAFDLL
ALGDTDYTSR PFVERRAELE RVLTGGHTFH VTPATVDVDT ARRWFHEFEG AGLDGVIAKP
LDGPYLPDKR VMFKVKHQRT ADCVVAGYRL HKSGDDAIGS LLLGLYTDDG ELASVGVIGA
FPMARRRALF AELQPLVATF DEHPWNWAAH ADPDVVRRYG GGSRWNAGKD LSFVPLRPER
VVEVRYDHME GRRFRHTAQF NRWRPDRDPR SCTYAQLEQP VTFRLGDIVP GLG
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