| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_5002 |
|---|
| Symbol | |
|---|
| ID | 4612681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 5242286 |
|---|
| End bp | 5242954 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639794695 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_940981 |
|---|
| Protein GI | 119871029 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.827142 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGAGACG AGCGTCGCGC CCGGGGCAGG CCCGCCCGGA TCAGCCGCGA GCAGATCGTC
GCCGCCGCGC GGCGGGCCCC CGGACCCGAA CTCACCATGC AGGCCGTCGC CGACGAACTC
GGCGTCAGCC GCAAGGCCCT GCACTACTAC GTCGGCAACC GCCAGGGCCT GCTCACGCTC
GTCGTGGTCG ACCGGTTCGA AGCCGAACTC AAGCGGGTGC ACCTGCCCGA CGACGGCGAC
TGGCGCGTGG TCCTGCGCGC CTACGCCCAC GCCTACCGCG ACGGCATCGT CCAGGTCGGC
GCGCAGATCA GTTCGGCCGC CGACCACACG CCGTTCCGCG GGGTGGGTGC GGTGGAGGTC
CTCGCGCTCG CGGAGCGTGT GCTGGCCGCC CTGCTCGCCG CGGGATTCGG CGTCGACGAC
GCGCGGCGCG GCGTCACCGC GGTGGCGAAC ATCGCGCAGT CAGCCGCGCA GAACGCCATG
AGCACCTCGA TGCGGGATGT TCATCAGGCC GAGACCCGGG CCGCGCTCGA ACGCACCCAG
GAGGCCGACT ATCCCGCGCT GCGTCTGGTG CTCGACAGCG CGCCCCGACC GGACGAGGGG
CAGTTCGAGT TCGAACTCGA TCTGGCGATC GCCGGGCTGG AACAACTGCT GCGCGGCGGT
CGACCCTAG
|
|---|
| Protein sequence | MGDERRARGR PARISREQIV AAARRAPGPE LTMQAVADEL GVSRKALHYY VGNRQGLLTL
VVVDRFEAEL KRVHLPDDGD WRVVLRAYAH AYRDGIVQVG AQISSAADHT PFRGVGAVEV
LALAERVLAA LLAAGFGVDD ARRGVTAVAN IAQSAAQNAM STSMRDVHQA ETRAALERTQ
EADYPALRLV LDSAPRPDEG QFEFELDLAI AGLEQLLRGG RP
|
|---|
| |