| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_4833 |
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| Symbol | |
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| ID | 4616248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. KMS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008705 |
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| Strand | + |
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| Start bp | 5061971 |
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| End bp | 5063842 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639794524 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_940813 |
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| Protein GI | 119870861 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGA CCCTCGATCA GGTCGTCACC GCGGCGGCCG CGGAGTTGAT GGCGGCCACC
GCCACCAACG TGGTCGAAAG CTGCACCCGG GTCCTCGCCG ACGTCGTCGC CCACCTGGGG
GTCGACTTCA GCTTCCTGCG GCACAACGAC CACACCATCA AGGCCACCAA GCTGGTCGCC
GAATGGCCGA TCCGCGACTA CATCCCGGAC CCGGACCCGA TCGGCACCAT CTATTTCGCC
GAGGCCGACC CCGTCTTCCG GCAGGCCGAG TACCTCAAGA CACCGCTCAT CGTGCGTCCC
GAACCGGACA ACGACGACTA CCAGCGCCGG ATCGAGGAGG GCCGAGGCGT GCCGTCGGTG
TCGATGGCAT GCGTGCCATT GCTCTCGGGT GAGATGACCT CTGGCATCCT CGGCTTCATC
AAGATCGGTG ACCGTGAGTG GACCACCGAG GAGCAGAACG CGCTGCAGGC GATCGCCACG
CTGTTCGCCC AGCTGCAGGC CCGCATCGCC GCCGAGGAGC AGCTCCAGTA CCTCGCCGAG
CACGACGATC TGTCCGGACT GCTGAACCGC CGGGCGCTGA TGGCGCACCT CGGCCTACGG
CTCGCCGAGG GTCAGCCCGG TCCGGTGTCG GTGCTGTTCC TCGATCTCGA CCGGCTCAAG
ACCGTCAACG ACTATCTGGG CCACAGCGCC GGTGACCAGT TCATCAAGAT GTTCGCCGAG
CGGTTGCGGG CGGGCACCGA GAAGCCCGCC GTGATCGCCC GCGTCGGCGG TGACGAGTTC
GTGGTGGTCC CCGACGAACC GATGGACGTC GTGGCGGTCG AGAGCTTCGC CCGCCGGCTG
CAGACGTGGT TGCAGCGGCG GGTCGTCATC GACGGCGAGA TGCTTGCGCG CACTGTGAGC
ATCGGCGTCG CCGTCGGCAC TCCCGGTGAC GACACCACAT CGGATCTGCT GCGCCGCGCC
GACCAGGCGG CCCTGTCGGC GAAGAGCACC GGCGGCAGCA AGACGGCGGT GTTCACCACG
GAGATGGCGT CCCAGCACGC CATCCGCAAC GACATCGAAC TGCACCTCGA GGGTGTGATC
GACGAGGCGA GCAGCGCGCT CGTCCTGCAC TACCTACCCG AGATCGACAT GCGCACCGGG
AAGGTGCTCG GCACCGAGGC ACTGGTCCGC TGGCGGCATC CGACCAGGGG GCTGCTGCTG
CCCGAGTCGT TCATCGGGGT GGCCGAATCC ATCAATCTCG CAGGCAAACT CGGCCGACTG
GTGATGCGCT CGGCATGCGC GGACTTCGCC CGCTGGAGGT CGCGCCGCAC CGCAGGCGAC
GCCATCCTGC GGATCAACGT CTCACCCGTG CAACTGGTTT CGGATGGATT CGCGGCGACC
GTCGCCGGCA CCCTCGACGA GTTCGGGGTC GACGGTTCCG CGGTGTGCCT GGAGATCACC
GAGAGCGTGG TGGTCCAGGA CATCGAGGCC ACCCGCCACA CACTGGCCGC ACTCAAAGAG
GTCGGCGTGC GCATCGCGAT CGACGACTTC GGTACCGGCT ACAGCGTTCT CACGCACCTG
AAGTCACTGC CCGTCGACAC CGTCAAGATC GACCGCAGCT TCGTCCGTGA CCTCGGCGCC
AGCCCCGGCG ACCTGGCGAT CGTGCGGGCC ATCCTGGCGT TGGCCGATGC GTTCGAACTC
GAGGTGGTGG CCGAAGGGGT GGAGACCGTC GCGGCCGCCA AGACGCTGCT CGAACTGGGT
TGCCCACGCG CGCAGGGGTT CATGCTGTCG CGTCCGGTCG ACGCGGCGGC GATGGAGGCG
TTGTTCCGTG AGGGGCGCAT CGCCGTCGAC GCGTGGCGTG ACGACGCCGC AACCGTGAAC
GGACGGCAGT AG
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| Protein sequence | MTRTLDQVVT AAAAELMAAT ATNVVESCTR VLADVVAHLG VDFSFLRHND HTIKATKLVA
EWPIRDYIPD PDPIGTIYFA EADPVFRQAE YLKTPLIVRP EPDNDDYQRR IEEGRGVPSV
SMACVPLLSG EMTSGILGFI KIGDREWTTE EQNALQAIAT LFAQLQARIA AEEQLQYLAE
HDDLSGLLNR RALMAHLGLR LAEGQPGPVS VLFLDLDRLK TVNDYLGHSA GDQFIKMFAE
RLRAGTEKPA VIARVGGDEF VVVPDEPMDV VAVESFARRL QTWLQRRVVI DGEMLARTVS
IGVAVGTPGD DTTSDLLRRA DQAALSAKST GGSKTAVFTT EMASQHAIRN DIELHLEGVI
DEASSALVLH YLPEIDMRTG KVLGTEALVR WRHPTRGLLL PESFIGVAES INLAGKLGRL
VMRSACADFA RWRSRRTAGD AILRINVSPV QLVSDGFAAT VAGTLDEFGV DGSAVCLEIT
ESVVVQDIEA TRHTLAALKE VGVRIAIDDF GTGYSVLTHL KSLPVDTVKI DRSFVRDLGA
SPGDLAIVRA ILALADAFEL EVVAEGVETV AAAKTLLELG CPRAQGFMLS RPVDAAAMEA
LFREGRIAVD AWRDDAATVN GRQ
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