| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_4828 |
|---|
| Symbol | |
|---|
| ID | 4616243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 5056904 |
|---|
| End bp | 5058304 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639794519 |
|---|
| Product | DNA repair protein RadA |
|---|
| Protein accession | YP_940808 |
|---|
| Protein GI | 119870856 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1066] Predicted ATP-dependent serine protease |
|---|
| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.963187 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.822465 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCAAGG CACGTTCTCA ATACCGCTGT TCGGAGTGCC GGCACATCAC CGCCAAATGG
GTGGGCCGCT GCCCGGACTG TGGCACGTGG GGAACGGTCG AGGAAGTCGC GGTCCTGGCC
GCCGTGGCCG GCGCACCCGC CCGCCACGCG GTGGCGCCCG CCTCCCCCGC TGTTCCGATC
AGCAGCATCG ACCCGGGCCG TACCAGACAC GACGAGACCG GGATCAGCGA ACTCGACCGG
GTCCTCGGCG GTGGGCTGGT ACCCGGTTCG GTGACGCTGC TCGCGGGTGA TCCTGGCGTC
GGCAAGTCGA CCCTGCTCCT CGAGGTCGCG CACCGCTGGG CCGTGTCGGG TCGGCGTGCG
CTGTACCTGA CCGGTGAGGA GTCGGCCGGC CAGGTGCGCC TGCGGGCCGA GCGCACCGGC
TGTACCCACG ACGAGCTGTA TCTCGCCGCG GAATCCGATC TGCCCACCGC GCTGGGCCAC
ATCGACGCCG TGCAGCCGAG CCTCGTGGTC GTCGACTCCG TGCAGACCAT GTCCACCAGC
GAGAACGACG GCGTCACCGG CGGCGTGACC CAGGTGCGGG CCGTCACCAC CGCGCTCACC
CAGTACGCCA AGGGGGCGGC GGGGCCGGGC GGCCCCGGTG GCATCGCCAT GGTGCTGGTC
GGCCACGTCA CCAAGGACGG GGCGATCGCC GGGCCGCGTT CGCTGGAACA TCTGGTCGAC
GTGGTGCTGC ATTTCGAGGG TGACCGCAAC TCGACGCTGC GGATGGTGCG CGGGGTCAAG
AACCGGTTCG GCGCAGCCGA CGAGGTCGGC TGTTTCCAGT TGCACGACAA CGGCATCGAA
TGCGTGGCCG ATCCGTCCGG GCTCTTCCGC GACCAGCGCG ACACCCCGGT GGCCGGCACC
GCGGTGACGG TGGCCCTCGA CGGTAAACGT CCACTCATCG GCGAGGTGCA GGCGCTGGTC
GGGCCGCCCA CCGGACCGCA TCCCCGCCGT GCCGTCAGCG GGATCGACGC CGCCCGCGCC
GCGATGATCG CCGCCGTCCT CGACAAACAC GCCAGGCTGC AGGTGGGACC CTGCGACATC
TACCTGTCGA CGGTCGGCGG TATGCGGCTG ACCGACCCGT CGTCGGACCT CGCGGTCGCG
ATCGCAATGG CCTCCGCGCG CAAGGAACGG GCGATGCCGG CGAACTCGGT GGTGATCGGC
GAGCTCGGCC TCGCGGGTGA TCTGCGGCGG GTGACAGGTA TGGACCGCCG CCTCGCCGAG
GCCGCCCGAC TGGGGTTCAC CACGGCCGTC GTACCGCCCG GCACGACGGG CGTACCGCCC
GGCCTTCGAG TGCTGCCCGC CGAGAACATC TCGGCGGCGT TGCGGGTCCT GGACCGCATC
GCAGACAATG GCGGCCGATG A
|
|---|
| Protein sequence | MAKARSQYRC SECRHITAKW VGRCPDCGTW GTVEEVAVLA AVAGAPARHA VAPASPAVPI
SSIDPGRTRH DETGISELDR VLGGGLVPGS VTLLAGDPGV GKSTLLLEVA HRWAVSGRRA
LYLTGEESAG QVRLRAERTG CTHDELYLAA ESDLPTALGH IDAVQPSLVV VDSVQTMSTS
ENDGVTGGVT QVRAVTTALT QYAKGAAGPG GPGGIAMVLV GHVTKDGAIA GPRSLEHLVD
VVLHFEGDRN STLRMVRGVK NRFGAADEVG CFQLHDNGIE CVADPSGLFR DQRDTPVAGT
AVTVALDGKR PLIGEVQALV GPPTGPHPRR AVSGIDAARA AMIAAVLDKH ARLQVGPCDI
YLSTVGGMRL TDPSSDLAVA IAMASARKER AMPANSVVIG ELGLAGDLRR VTGMDRRLAE
AARLGFTTAV VPPGTTGVPP GLRVLPAENI SAALRVLDRI ADNGGR
|
|---|
| |