| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_4700 |
|---|
| Symbol | |
|---|
| ID | 4616115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 4922970 |
|---|
| End bp | 4924724 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639794392 |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_940681 |
|---|
| Protein GI | 119870729 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACCC GGCTGACCAA ACTGCAACTG TCGATCTTCG CCGTCGTCAC GGTCCTCACC
GTCGGCGCGA TCTCGCTGTT CTATCTGCAC CTGCCTGCCG CGGTCGGCAT CGGGGCCTAC
GACGTCACGG CCAAGTTCAC CGCCGGTGGT GGCCTCTACG AGAACGCCAA CGTCACCTAC
CGGGGCGTGA CGGTCGGCCG GGTCGAGAAG GTGGGGCTGG CCGACGACGG GGTCGTCGCG
CAGATGCGGC TCAACAGCGG CACCCCGGTG CCCGAGAACG TCACGGCCAC GGTCAAGAGC
GTCTCGGCGA TCGGCGAGCA GTACATCGAC CTGGTGCCGC CGGAGAGGGC GTCGAAGTCG
ATGCTGCGCG ACGGGGCGGA CATCGGGCTG AACCGCACCG CGATCGGTCA GGACATCTCC
GGGCTGCTCG AAGAGGCCGA CCGGCTGGTC TCCAGCGTCG GCGACAGCCG GATCCAGGAC
GTGCTGCGTG AGGCGTTCAA GGCGTTCAAC GGTTCCGGTC CCGAGCTGTC TCGGTTGATC
CAGTCCTCGC GTCTGCTGGT CGACGAGGCC AACGCGAACT ACGACGAGGT CGCTCAGCTG
ATCGATCAGG CCGGTCCGTT CCTCGACGCG CAGATCCGCA GCGGCGACGA CATCCGGTCG
CTGGCGGACG GACTGGCCGA CGTCACCGGC AACGTGGCCG GGGCCGACGC GCAGCTGCGC
GCGACCCTGG AGACGGTGCC CGGCACCACC GAGGCGGCCA ACACCACGTT CGAGGGGATC
CGGCCCACCT TTCCGGTGCT GGCCGCCAAT CTGGCGAACT TCGGGCGCAT CGGGGTCATC
TACCACAAGT CGCTCGAGCA GGCGCTGGTG ATCTTTCCGG CCCTGTTGGC CGCGCTGAAC
ACCGTCGCGG GCGGGGTGCC GGCGGATGAA GGCGGCAAGC TGGACTTCAA GATCCACCTC
AACGACCCAC CGACCTGTTC GGTCGGGTTC CTGCCGCCGA CGTCGATCCG CTCGCCGGCC
GACACGACGC TGCGGGACCT GCCCAGGGAC CTGTACTGCA AGGCCCCGCA CAACGATCCG
ACGGTCGTGC GCGGCGCCCG AAACTATCCG TGCATGGAGT TCCCGGGCAA GCGCGCGGCG
ACCATTCAGC AGTGCCGGGA CCCCGAGGGG TTCGTGCCGA TCGGCAGCAA TCCGTGGCGT
GGCCCGCCGG TGCCCATCGG CGAACCGATC CAGGATCCGC GAATGATCCT GCCGCAGAAC
AAGTTCCCGT TCATCCCGCC GCAGGTCGAC CCCGATCCGG GGCCGCCGGT GGTGCAGCTT
CCGCCGGGCG TGCAGCCGGG CCCGGGGCCG GCGCCACATG CGCCGTTCCC GCTGCCGGTG
CCGCCGAACG ACCCGGGTGT TCCACCGCCG CTGCCGTACT ACGCGCCGCC GGACCAGTTG
GTGCCGCCGT ACGGCCGACC GGCGCCCGCG CCACCGCCTC CTCCGCCGTC GCTGGCGCCG
CCGCCACCGG CCGACGCTCC GCCGGTGCCC GCACCGGAAC CTGCGCCGGG TCCCGGCCCG
CTGCCGGGTC GGTTGCCCGG TCCGTTGCCG GCGGAGGCCC CGATGGCCAG CGGTCCGACG
ACGGCCACGT ACGACTCCAG GACGGGCGTG TTCGCCGATC CCGCCGGAGG GGTTGGCGTG
TACGCCCCGG GAGCTGACAA ACTGGCGCCT GCGGAAAACT GGGCAGACCT GATGATGGCT
CCAAGGCAGA TGTGA
|
|---|
| Protein sequence | MLTRLTKLQL SIFAVVTVLT VGAISLFYLH LPAAVGIGAY DVTAKFTAGG GLYENANVTY
RGVTVGRVEK VGLADDGVVA QMRLNSGTPV PENVTATVKS VSAIGEQYID LVPPERASKS
MLRDGADIGL NRTAIGQDIS GLLEEADRLV SSVGDSRIQD VLREAFKAFN GSGPELSRLI
QSSRLLVDEA NANYDEVAQL IDQAGPFLDA QIRSGDDIRS LADGLADVTG NVAGADAQLR
ATLETVPGTT EAANTTFEGI RPTFPVLAAN LANFGRIGVI YHKSLEQALV IFPALLAALN
TVAGGVPADE GGKLDFKIHL NDPPTCSVGF LPPTSIRSPA DTTLRDLPRD LYCKAPHNDP
TVVRGARNYP CMEFPGKRAA TIQQCRDPEG FVPIGSNPWR GPPVPIGEPI QDPRMILPQN
KFPFIPPQVD PDPGPPVVQL PPGVQPGPGP APHAPFPLPV PPNDPGVPPP LPYYAPPDQL
VPPYGRPAPA PPPPPPSLAP PPPADAPPVP APEPAPGPGP LPGRLPGPLP AEAPMASGPT
TATYDSRTGV FADPAGGVGV YAPGADKLAP AENWADLMMA PRQM
|
|---|
| |