Gene Mkms_4549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_4549 
Symbol 
ID4612493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp4782662 
End bp4784347 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content73% 
IMG OID639794236 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_940530 
Protein GI119870578 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.36171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.408424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCATG TGATCACCCA GTCGTGCTGC AGTGACGGGT CGTGTGTCTT CGCCTGCCCG 
GTGAACTGCA TCCACCCCAC ACCCGACGAG CCGGGCTTCG CGACCGCCGA GATGCTCTAC
ATCGACCCGG CGGCCTGCGT CGACTGCGGA GCCTGCGTCA GCGCCTGTCC GGTCGGCGCG
ATCGCCCCTG AGGCCACGTT GACCGACTCG CAGCTGCCGT TCGTCGAACT CAACGCGGCG
TTCTATCCAC CGCGCCCGCC CGACGAGAAG GTGCCGCCCA CCTCCAAGCT GGCGCCGGTG
CCCGACGCCC CCGTCGTCCG CTCACGTCCC GACGGCCCGC TGAGGGTCGC CATCGTGGGA
TCCGGCCCGG CCGCCATGTA CGCCGCCGAC GAACTGCTCA CCCAGCGCGG GGTGCGGGTC
ACGATGTTCG AGCGGCTGCC CACGCCCTAC GGGCTGGTCC GCGCGGGCGT CGCCCCCGAC
CACCAGAGCA CCAAGCGGGT GACGCGGTTG TTCGACCGGG TGGCGGCGCG GCGTGAGCTG
AGGCTCTACC TCAACGTCGA GGTCGGCACC CACCTGACCC ACGAAGACCT GCTGGCCCAC
CACCACGCCG TGCTGTACGC CGTCGGCGCC CCCAACGACC GCCGCCTCGA CGTCGACGGG
ATGGGCCTGC CCGGCACGGC GACAGCCACC GAGGTCGTCG CCTGGTACAA CGGCCACCCC
GACTACGCGG CCCTGCCGGT CGCACTCGAC CACCGCCGAG CGGTCGTGAT CGGAAACGGC
AACGTGGCAC TCGACGTCGC CCGCATCCTC ACCACCGACC CGGACCGGCT GGCCGCCACC
GACATCGCCG ACCACGCGCT GGCCGCGCTG CGCGCCTCGC GCATCGACGA GGTGGTGGTC
GCGGCCCGGC GCGGGCCCGC GCAGTCGGCG TTCACGCTGC CCGAGCTGAT CGGTCTCACC
GCCGCCTGCG ACGTCGTGCT CGACGCGGCC GACCACGAAC TGGTCCGGCG CGACCTCTGC
GACGAAACCG ATCCGCTCAC CCGCAACAAG CTCGAGATCC TCGCGAAGCT GCCCGACGCC
TCGGCGCCGG CCACCCGCCC GCGGATCCGG CTGGCCTACC GGCTGACACC GCGACGCGTC
ACCGGTGCGA CCCGCGCCGA CGGTGTCGAG TTCACCGTCA CCGGTACCGA CGAGGTGCGC
CGCCTCGACG CCGGGCTCGT GCTGTCCTCC ATCGGCTACC GCGGCAGGCC GGTCGCGGGG
TTGCCGTTCG ACGAGGCCGA CGGCGTCGTC CCCAACGAGA GTGGCCGTGT CGTCGACCCG
GCGTCCGGCC GATCCGTCCC GGGAAGTTAC GTCGCGGGCT GGATCAAGCG CGGACCGACC
GGCTTCATCG GTACCAACAA GTCCTGCGCC GCGCAGACGG TGCACACCCT CGTGGCCGAT
TACAACGCCG GCGCACTCGC GGTGCCGTCG GCCGGCTACG GCGATCTGGA CCGGTTCGTG
CGAGAGCGTC GGCCCGACGT GGTCGACAGC CAGGGCTGGC GCGCCATCGA CGCGGCGGAG
ATCGCCCGCG GGGGTGACCG ACGCCCGCGG GTGAAGTTCA CGTCGGTCGC CGACATGCTG
CAGGCGGCGG CCGCCGCGCC GGAGCCGCCG CTCGCGCGGC GTCTGCTCGC CGGTCTGCTG
CGGTAG
 
Protein sequence
MPHVITQSCC SDGSCVFACP VNCIHPTPDE PGFATAEMLY IDPAACVDCG ACVSACPVGA 
IAPEATLTDS QLPFVELNAA FYPPRPPDEK VPPTSKLAPV PDAPVVRSRP DGPLRVAIVG
SGPAAMYAAD ELLTQRGVRV TMFERLPTPY GLVRAGVAPD HQSTKRVTRL FDRVAARREL
RLYLNVEVGT HLTHEDLLAH HHAVLYAVGA PNDRRLDVDG MGLPGTATAT EVVAWYNGHP
DYAALPVALD HRRAVVIGNG NVALDVARIL TTDPDRLAAT DIADHALAAL RASRIDEVVV
AARRGPAQSA FTLPELIGLT AACDVVLDAA DHELVRRDLC DETDPLTRNK LEILAKLPDA
SAPATRPRIR LAYRLTPRRV TGATRADGVE FTVTGTDEVR RLDAGLVLSS IGYRGRPVAG
LPFDEADGVV PNESGRVVDP ASGRSVPGSY VAGWIKRGPT GFIGTNKSCA AQTVHTLVAD
YNAGALAVPS AGYGDLDRFV RERRPDVVDS QGWRAIDAAE IARGGDRRPR VKFTSVADML
QAAAAAPEPP LARRLLAGLL R