Gene Mkms_4458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_4458 
Symbol 
ID4612401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp4691108 
End bp4691689 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content67% 
IMG OID639794144 
ProductRNA polymerase sigma factor SigK 
Protein accessionYP_940439 
Protein GI119870487 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.13066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0588281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC TGACCCAGCC GGTTAGGCTA CCGTTCGTGA CCACTGACCT CGACGTACTG 
TTACGGCAGG TGGCCGAGCG GGATGTCGAT GCGTTCGCGG CCCTCTACGA CCGGACCCGG
TCGCGGGTGT ACGGGATGGT CACCCGGGTG CTGCGGGATC CGGGCTACAG CGAAGAGACC
ACTCAGGACA TCTACCTGCA GGTGTGGCGG TCGGCCGGCA GCTACGACCC CAAGGCCGGG
TCGCCGATGG CGTGGCTGCT GACGTTGGCG CACCGTCGCG CCGTCGACCG GGTGCGTTCG
GAGGAGGCCG CCTCGCAGCG GGAGTCCCGG TACGGCGCCG CGAGCGTCGA CCCGCCCGTC
GACCACGTCG CCGACTCGGT GATCCTGCTC GACGAACGCC GTCGCGTCGT CGACTGCATG
GGATCGCTGT CGGATCTGCA ACGCGAAGCG ATCCAGCTGG CGTATTACGA GGGACTGACG
TATGTCCAGG TCTCCGAGCG TCTGTCGGCG AATCTGGCCA CAATCAAATC GCGGATGCGC
GGCGGCATCC GCGGTCTCAA GAACTGTCTG GGCATGTCAT GA
 
Protein sequence
MTALTQPVRL PFVTTDLDVL LRQVAERDVD AFAALYDRTR SRVYGMVTRV LRDPGYSEET 
TQDIYLQVWR SAGSYDPKAG SPMAWLLTLA HRRAVDRVRS EEAASQRESR YGAASVDPPV
DHVADSVILL DERRRVVDCM GSLSDLQREA IQLAYYEGLT YVQVSERLSA NLATIKSRMR
GGIRGLKNCL GMS