Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_4448 |
Symbol | |
ID | 4612391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | + |
Start bp | 4682116 |
End bp | 4682907 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639794134 |
Product | short chain dehydrogenase |
Protein accession | YP_940429 |
Protein GI | 119870477 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.63337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0303285 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCTGG ACAGATTCCG GCTCGACGGA CAGGTCGCCA CCGTCACCGG CGCGGGCCGA GGACTGGGCG CCGCCATCGC GGTGGCGTTC GCGGAAGCCG GTGCGGACGT GGTGATCGCG GCCCGCACCG AATCGCAACT CGACGAGGTC GCCGAGCGGA TCCGGGCGAC CGGACGGCGC GCCCACGTCG TCGTCGCCGA CCTCGCCCAC CCCGAGTCGA CGGCCGGGCT CGCACCGGCC GCGGTGGAGG CCTTCGGAAA ACTAGACATC GTCGTCAACA ACGTCGGCGG CACCATGCCG GCCGCCCTGA CCGACACCTC CGCGAAGGAT CTCAAGGACG CGTTCACCTT CAACGTCGCC ACCGCCCACG CGCTGACCAC GGCCGCGGTT CCGTTGATGC TCGAGCACTC CGGCGGCGGC AGCGTCATCA ACATCACCTC GACGATGGGC CGCCTCGCCG GCCGCGGCTT CGCCGCCTAC GGCACCGCGA AAGCCGCGCT CGCGCACTAC ACCCGGCTCG CCGCGCTCGA CCTCTGCCCG CGGATCCGGG TCAACGCGAT CGCGCCCGGT TCCATCCTCA CCTCCGCGCT CGACATCGTC GCCAGCAACG ACGACCTTCG CGAGCCCATG GAGAAGGCGA CGCCGATGCG CCGGCTCGGC GATCCCGAGG ACATCGCCGC CGCTGCGGTC TACCTGGCCT CGCCGGCGGC GAGCTACCTG ACCGGTAAGA CCCTCGAGGT CGACGGCGGG CTGACGTTCC CCAACCTCGA CATGCCCTTC CCGGACCTCT AG
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Protein sequence | MILDRFRLDG QVATVTGAGR GLGAAIAVAF AEAGADVVIA ARTESQLDEV AERIRATGRR AHVVVADLAH PESTAGLAPA AVEAFGKLDI VVNNVGGTMP AALTDTSAKD LKDAFTFNVA TAHALTTAAV PLMLEHSGGG SVINITSTMG RLAGRGFAAY GTAKAALAHY TRLAALDLCP RIRVNAIAPG SILTSALDIV ASNDDLREPM EKATPMRRLG DPEDIAAAAV YLASPAASYL TGKTLEVDGG LTFPNLDMPF PDL
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