| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_4412 |
|---|
| Symbol | |
|---|
| ID | 4612355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 4639127 |
|---|
| End bp | 4640029 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639794098 |
|---|
| Product | succinyl-CoA synthetase subunit alpha |
|---|
| Protein accession | YP_940393 |
|---|
| Protein GI | 119870441 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00673609 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATCT TTCTGAACAA GGACTCCAAG GTCATCGTCC AGGGCATCAC CGGCGGTGAG
GGCACCAAGC ACACCGCGCT GATGCTCAAG GCCGGCACCC AGCTGGTCGG CGGGGTCAAC
GCCCGTAAGG CGGGGACCAC CGTCAGCCAT GTCGACAAGG ACGGCAAGGA CGTCGAACTG
CCGGTGTTCG GCAGCGTTGG CGATGCGATG AAGGAGACCG GCGCCGACGT GTCGGTGGTC
TTCGTGCCGC CGAAGTTCGC CAAGGACGCG ATCATCGAGG CCATCGACGC CGAGATCCCG
CTGCTCGTGG TGATCACCGA GGGCATCCCG GTGCAGGACA CCGCCTACGC GTGGGCCTAC
AACGTCGAGA AGGGACAGAA GACCCGCATC ATCGGCCCCA ACTGCCCCGG CATCATCACC
CCCGGTGAGG CGCTGGCCGG CATCACGCCC GCCAACATCA CCGGCTCCGG CCCGGTCGGC
CTGGTCTCGA AGTCCGGCAC GTTGACCTAC CAGATGATGT ACGAGCTGCG TGACTTCGGC
TTCTCGACCG CGATCGGCAT CGGCGGCGAC CCGGTCATCG GCACCACGCA CATCGACGCG
ATCGAGGCGT TCGAGAAGGA TCCCGACACA AAGGTCATCG TGATGATCGG TGAGATCGGC
GGCGACGCCG AGGAGCGGGC GGCTGACTAC ATCAAGGACA ACGTCTCCAA GCCGGTCGTC
GGCTATGTCG CGGGCTTCAC GGCTCCGGAG GGCAAGACGA TGGGCCACGC CGGTGCCATC
GTGTCCGGTT CGTCGGGCAC CGCGGCGGCC AAGAAGGAAG CGCTCGAGGC GGCAGGCGTG
AAGGTCGGCA AGACCCCGTC GGAGACCGCG CAGCTCGCCC GGGAGATCCT GCAGAACCAG
TAG
|
|---|
| Protein sequence | MSIFLNKDSK VIVQGITGGE GTKHTALMLK AGTQLVGGVN ARKAGTTVSH VDKDGKDVEL
PVFGSVGDAM KETGADVSVV FVPPKFAKDA IIEAIDAEIP LLVVITEGIP VQDTAYAWAY
NVEKGQKTRI IGPNCPGIIT PGEALAGITP ANITGSGPVG LVSKSGTLTY QMMYELRDFG
FSTAIGIGGD PVIGTTHIDA IEAFEKDPDT KVIVMIGEIG GDAEERAADY IKDNVSKPVV
GYVAGFTAPE GKTMGHAGAI VSGSSGTAAA KKEALEAAGV KVGKTPSETA QLAREILQNQ
|
|---|
| |