Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_4404 |
Symbol | |
ID | 4612347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | + |
Start bp | 4629368 |
End bp | 4630486 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639794090 |
Product | diguanylate cyclase |
Protein accession | YP_940385 |
Protein GI | 119870433 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGCG CAATGCGCGA ATGGTGGCGC CAACCAGACC ACTACTACTG GCTCACCGCA TTCCTCGCGG CTCGCGGCGC GCAACGCGGT ATCTGCCGCA TGGTCGCGGG GTCGCTCCTC GGATTCGCTC TCGTCCTGCT GGTGTCGATG TTCAGCCCGG CGGGACCGAC GGGCCTGGCC GGGCGCATCG GGACGGCGGT CATCGCGGTG GCCCTCATCG GCATGGCGAT CGGCTGGTGG CGCGAGGGCT GGCCCAGCCA ACGTCAATCG GCCGGGTTCG TGGTCGCGGC CGCACTGGCG ATCGGCGTCG GGTGTCTGAT CAAAGCCGAT CCGTTCAACG GCATGTTCGG TGCGGCGACC TTCGCGGTCC TCGCCGGCTA CATCGCGTTC TTCCACACGC CGAAGATGAT GGCGTTCAAC TTCGTGGTGG CACTGCTCAC CTCGACGGTG CTCGCCGTGC GCGTGGCGCT CGACGGCGAT CCGGCGCTGG CCATCTCGAC GCTGATCTTC CTGGTCATCC TCTACGTCGC GACCCCGTCG GTGTGTCATG CGCTGGTCCA CCTGCTGGGC ATCGACGTCC TCAACGCCGA CATCGACCCG CTGACCGGCC TCTACAACCG CGACGCCTTC GACCGTGCCG CTGCGGCCTA CATCAGCTCC CGCAACCGCG ACGACGACCG GTACTTCGTC CTCGTCGTCG TGGACCTGGA CAACTTCGCG CTGCTCACCC AGGCCAAGGG CCGGCAGGCC GGCGAGCGGG CGCGGGTCGC CGCGGCGCAG ACCCTGCGGG AGACCACGCG GCAGAACGCT GTGATCGCCC ACCTACCCGA GACCGAGTTC CTGATCGCCG ACAGCTTCCC GACGACCGAC AGCTCAGCGC TCGTCGAGCG GGTGCGCAGT GCGATCCGCA CCACCCCGCC GCGGACGTCG GCGAGTATCG GCGTGGTGAG CACGCCGATG CTGGGGCTCG TGGAACGCCC ACCGGAGCAG GTCCTCGACG AGTTGCTCGA GCTCGCCCGT TCGGCCGTCG TCGTGGCCCG CCGGGCCGGT GGCAATCAGG CGCACCACAT CAACTGCCCA CCGCTGCGGG CGCTCGAAGA CGACGAACCA CCGCTCTAA
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Protein sequence | MTGAMREWWR QPDHYYWLTA FLAARGAQRG ICRMVAGSLL GFALVLLVSM FSPAGPTGLA GRIGTAVIAV ALIGMAIGWW REGWPSQRQS AGFVVAAALA IGVGCLIKAD PFNGMFGAAT FAVLAGYIAF FHTPKMMAFN FVVALLTSTV LAVRVALDGD PALAISTLIF LVILYVATPS VCHALVHLLG IDVLNADIDP LTGLYNRDAF DRAAAAYISS RNRDDDRYFV LVVVDLDNFA LLTQAKGRQA GERARVAAAQ TLRETTRQNA VIAHLPETEF LIADSFPTTD SSALVERVRS AIRTTPPRTS ASIGVVSTPM LGLVERPPEQ VLDELLELAR SAVVVARRAG GNQAHHINCP PLRALEDDEP PL
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