Gene Mkms_4404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_4404 
Symbol 
ID4612347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp4629368 
End bp4630486 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content69% 
IMG OID639794090 
Productdiguanylate cyclase 
Protein accessionYP_940385 
Protein GI119870433 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCG CAATGCGCGA ATGGTGGCGC CAACCAGACC ACTACTACTG GCTCACCGCA 
TTCCTCGCGG CTCGCGGCGC GCAACGCGGT ATCTGCCGCA TGGTCGCGGG GTCGCTCCTC
GGATTCGCTC TCGTCCTGCT GGTGTCGATG TTCAGCCCGG CGGGACCGAC GGGCCTGGCC
GGGCGCATCG GGACGGCGGT CATCGCGGTG GCCCTCATCG GCATGGCGAT CGGCTGGTGG
CGCGAGGGCT GGCCCAGCCA ACGTCAATCG GCCGGGTTCG TGGTCGCGGC CGCACTGGCG
ATCGGCGTCG GGTGTCTGAT CAAAGCCGAT CCGTTCAACG GCATGTTCGG TGCGGCGACC
TTCGCGGTCC TCGCCGGCTA CATCGCGTTC TTCCACACGC CGAAGATGAT GGCGTTCAAC
TTCGTGGTGG CACTGCTCAC CTCGACGGTG CTCGCCGTGC GCGTGGCGCT CGACGGCGAT
CCGGCGCTGG CCATCTCGAC GCTGATCTTC CTGGTCATCC TCTACGTCGC GACCCCGTCG
GTGTGTCATG CGCTGGTCCA CCTGCTGGGC ATCGACGTCC TCAACGCCGA CATCGACCCG
CTGACCGGCC TCTACAACCG CGACGCCTTC GACCGTGCCG CTGCGGCCTA CATCAGCTCC
CGCAACCGCG ACGACGACCG GTACTTCGTC CTCGTCGTCG TGGACCTGGA CAACTTCGCG
CTGCTCACCC AGGCCAAGGG CCGGCAGGCC GGCGAGCGGG CGCGGGTCGC CGCGGCGCAG
ACCCTGCGGG AGACCACGCG GCAGAACGCT GTGATCGCCC ACCTACCCGA GACCGAGTTC
CTGATCGCCG ACAGCTTCCC GACGACCGAC AGCTCAGCGC TCGTCGAGCG GGTGCGCAGT
GCGATCCGCA CCACCCCGCC GCGGACGTCG GCGAGTATCG GCGTGGTGAG CACGCCGATG
CTGGGGCTCG TGGAACGCCC ACCGGAGCAG GTCCTCGACG AGTTGCTCGA GCTCGCCCGT
TCGGCCGTCG TCGTGGCCCG CCGGGCCGGT GGCAATCAGG CGCACCACAT CAACTGCCCA
CCGCTGCGGG CGCTCGAAGA CGACGAACCA CCGCTCTAA
 
Protein sequence
MTGAMREWWR QPDHYYWLTA FLAARGAQRG ICRMVAGSLL GFALVLLVSM FSPAGPTGLA 
GRIGTAVIAV ALIGMAIGWW REGWPSQRQS AGFVVAAALA IGVGCLIKAD PFNGMFGAAT
FAVLAGYIAF FHTPKMMAFN FVVALLTSTV LAVRVALDGD PALAISTLIF LVILYVATPS
VCHALVHLLG IDVLNADIDP LTGLYNRDAF DRAAAAYISS RNRDDDRYFV LVVVDLDNFA
LLTQAKGRQA GERARVAAAQ TLRETTRQNA VIAHLPETEF LIADSFPTTD SSALVERVRS
AIRTTPPRTS ASIGVVSTPM LGLVERPPEQ VLDELLELAR SAVVVARRAG GNQAHHINCP
PLRALEDDEP PL