Gene Mkms_4347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_4347 
Symbol 
ID4612289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp4565530 
End bp4567164 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content68% 
IMG OID639794032 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_940328 
Protein GI119870376 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0614831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAGGT TCACCGAGAA GATGTACCGC AACGCGCGAA CCGTGAGCAC CGGCATGGTG 
ACCGGCGAGC CGCACGAACC CATCCGCCAC ACCTGGGGTG AGGTGCACGA GCGGGCCCGC
CGCATCGCCA GCGGACTCGC GGCAGCCGGT GTCGGCCACG GCGACGCCGT GGGTGTGCTG
GCCGGCTTCC CGGTCGAGAT CGCCCCGACC GCGCAGGGGC TGTGGATGCG CGGCGCGAGC
CTGACCATGC TGCATCAGCC GACACCGCGC ACCGACCTCG CGATGTGGGC CGAAGACACG
ATGAACGTCA TCGGCATGAT CGAGGCGAAG GCCGTCATCG TCTCCGAGCC GTTCGTGGTC
GCCATCCCGG TGCTCGAGGA GAAGGGGATC AAGGTCCTCA CCGTCAGTGA CCTGCTGGCG
GCCGAGCCGA TCGACCCCAT CGAGGTGGGC GAGGACGATC TGGCGCTGAT GCAGCTGACG
TCGGGATCGA CCGGATCCCC GAAGGCCGTG CAGGTGACGC ACCGCAACAT CCACTCCAAC
GCCGAGGCGA TGTTCATCGG CGCGGAGTAC GACGTCGAGA ACGACGTCAT GGTCAGCTGG
CTGCCCTGTT TCCACGACAT GGGCATGGTC GGCTTCCTCA CCATCCCGAT GTACTTCGGC
GCCGAGCTCG TCAAGGTCAC GCCGATGGAC TTCCTGCGCG ACACCCTGCT GTGGGCCAAG
CTCATCGACA AGTACAAGGG CACGATGACG GCGGCGCCGA ACTTCGCCTA TGCGCTGCTG
GCCAAGCGGC TGCGCCGCCA GGCCAAACCG GGCGACTTCG ACCTGTCCAC GCTGCGATTC
GCGCTCTCGG GCGCCGAGCC GGTCGAACCC GCCGACGTCG AGGATCTGAT CGACGCCGGA
AAGCCGTTCG GCCTCAAGCC GGAAGCCATC CTGCCCGCAT ACGGCATGGC CGAGACCACG
CTCGCCGTGT CGTTCTCGCC GTGCGGCGCC GGTCTCGTCG TCGACGAGGT CGACGCCGAC
CTGCTGGCTG CGCTGCGCCG CGCCGTGCCC GCCACCAAGG GCAACACCAA GCGGCTGGCC
GATCTGGGCC CGCTGCTCAC CGATCTCGAA GCCCGCGTCA TCGACGAGAA CGGCAATGTC
ATGCCGCCTC GCGGAGTGGG CGTCATCGAA CTGCGCGGCG AATGCGTCAC GCCCGGGTAC
ATGACCATGG GTGGATTCAT CCCGGCCCAG GACGACCACG GCTGGTACGA CACCGGCGAC
CTCGGCTACA TCACCGAGGA GGGTCACGTC GTGGTCTGCG GCCGCGTCAA GGACGTGATC
ATCATGGCCG GGCGCAACAT CTACCCGACC GACATCGAAC GCGCGGCGGG CCGCGTCGAG
GGTGTCCGGC CGGGTTGTGC CGTCGCGGTG CGCCTCGATG CCGGACACTC GCGTGAGACG
TTCGCCGTGG CGGTGGAGTC CAACAACTGG CAGGATCCCG CCGAGGTGCG CCGCATCGAG
CATCAGGTCG CCCACGAGGT CGTGGCCGAG GTCGAGATGC GTCCACGCAA TGTCGTGGTT
CTCGGACCGG GCAGCATCCC GAAGACCTCG TCGGGCAAGC TGCGCCGCGC CAACTCGGTC
TCGCTGGTCA CCTAA
 
Protein sequence
MSRFTEKMYR NARTVSTGMV TGEPHEPIRH TWGEVHERAR RIASGLAAAG VGHGDAVGVL 
AGFPVEIAPT AQGLWMRGAS LTMLHQPTPR TDLAMWAEDT MNVIGMIEAK AVIVSEPFVV
AIPVLEEKGI KVLTVSDLLA AEPIDPIEVG EDDLALMQLT SGSTGSPKAV QVTHRNIHSN
AEAMFIGAEY DVENDVMVSW LPCFHDMGMV GFLTIPMYFG AELVKVTPMD FLRDTLLWAK
LIDKYKGTMT AAPNFAYALL AKRLRRQAKP GDFDLSTLRF ALSGAEPVEP ADVEDLIDAG
KPFGLKPEAI LPAYGMAETT LAVSFSPCGA GLVVDEVDAD LLAALRRAVP ATKGNTKRLA
DLGPLLTDLE ARVIDENGNV MPPRGVGVIE LRGECVTPGY MTMGGFIPAQ DDHGWYDTGD
LGYITEEGHV VVCGRVKDVI IMAGRNIYPT DIERAAGRVE GVRPGCAVAV RLDAGHSRET
FAVAVESNNW QDPAEVRRIE HQVAHEVVAE VEMRPRNVVV LGPGSIPKTS SGKLRRANSV
SLVT