Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_4327 |
Symbol | |
ID | 4612268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | - |
Start bp | 4542720 |
End bp | 4543478 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639794011 |
Product | putative lipoprotein LpqU |
Protein accession | YP_940308 |
Protein GI | 119870356 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.295293 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTGACG AGGGGAGCCT GTCTACCCGG ACGAAAGCTC GCTGGATGAC GGTGGCTGCC GTCGTCGTCG CGACGATCCT GGTGCTGGCC TCGAGTTGCT CATGGCAGAT GGGCATCCCC ATTCCGGAGG GTGTCCCGCC GCCCCCCGGT GACCCCGTCC CCGCGGTCGA CACCTACGCC GACGGCCGCC CCGCCGATGC GTTGCGCGAA TGGGCCGCCG AACGGGCGCC GCAACTGGGC ATCCCGGTGA CCGCGTTGGA GGCCTACGCC TACGCCGCCC GGGTCGCCGA GGTCGAGAAT CCGGATTGCC ATCTGACCTG GACCACGCTC GCCGGGATCG GCATGGTCGA GAGCCACCAC GGCAACTACC GCGGTGCGAT GGTCGCCGCC AACGGTGAGG TCACCCCGCC GATCCGCGGG ATGCGCCTGG ACGGTTCGAG CGGCAACCTC GAGATCGTGG ACACGGACTC GGGTCTCCTC GACGGCGACG ACGAGTTGGA CCGCGCGATG GGGCCGATGC AGTTCATCCC CGAGACGTGG CGGCTGTACG GCGTGGACGC CAACGGCGAC GGCAAGTCCG ATCCGGACAA CATCGACGAT GCGGCGCTGT CCGCGGCCGG TTACCTCTGC TACACCGGCA AGGACCTCTC CACCCCGCGC GGCTGGATGA ACGGGCTGCG CGCCTACAAC TACTCCGAGC AGTACGCCCG CACGGTGCGC GACTGGGCCA CCGCGTACGC CGACGGCCGC CGACTCTAA
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Protein sequence | MSDEGSLSTR TKARWMTVAA VVVATILVLA SSCSWQMGIP IPEGVPPPPG DPVPAVDTYA DGRPADALRE WAAERAPQLG IPVTALEAYA YAARVAEVEN PDCHLTWTTL AGIGMVESHH GNYRGAMVAA NGEVTPPIRG MRLDGSSGNL EIVDTDSGLL DGDDELDRAM GPMQFIPETW RLYGVDANGD GKSDPDNIDD AALSAAGYLC YTGKDLSTPR GWMNGLRAYN YSEQYARTVR DWATAYADGR RL
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