Gene Mkms_4297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_4297 
Symbol 
ID4612238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp4521292 
End bp4523169 
Gene Length1878 bp 
Protein Length625 aa 
Translation table11 
GC content69% 
IMG OID639793982 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_940279 
Protein GI119870327 
COG category[I] Lipid transport and metabolism 
COG ID[COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0348009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.537155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCT ATCGAGACCT GTTCAGGGCC AGCATCGACG ATCCCGAGAA GTTCTGGGCG 
GAGGCCGCCC GAGCGGTCAC CTGGACCAGG GAACCCACCC GCGTCCTCGA CGACTCCAAC
CCGCCGTTCT ACCGCTGGTT CCCCGACGGT GAGCTCAACA CCTGCGCCAA CGCCCTCGAC
CGCCACGTCG AGGACGGCCG CGGCGAGCAG GCCGCGCTGA TCTACGACTC CCCCGTCACC
GGCGTCAAAG GCACCTACAC CTACCGCGAG TTGCTCGATC AGACCGCACG GTTCGCCGGG
GCGCTGCGCG GGCTCGGCGT CGAAAAGGGC GACCGCGTCG TCATCTACCT GCCGATGGTC
CCCGAGGCGC TGATCGCGAT GCTGGCGTGT GCACGCCTGG GCGCGGTGCA CTCCGTGGTG
TTCGGCGGAT TCGCCGCCCA CGAACTGGCC GCCCGCATCG ACGACGCCCG CCCCACGGTG
GTGGTGTCGG CGTCCTGCGG TGTCGAGCCG ACCCGCACCA TCGAGTACAA GCCGATGCTC
GACGCCGCCC TCGAGATGGC CGAACACAAA CCGGTCGGAT GCGTGATCCT GCAGCGCGAA
CACCACCGCT GCGAACTCAC CGACGGCCGC GACCACGACT GGACCGAACT CGTCGCCGGC
GCCGACGCCG TCGACCCCGT ACCGGTCGCC GCCACCGACC CGCTCTACGT CCTCTACACC
TCGGGCACCA CCGGCAAACC CAAGGGCATC GTCCGCGACA ACGGCGGACA CGCCGTCGCC
CTGCTGTGGA GCATGCGCAA CATCTACGAC ACGCAGCCCG GCGATGTGTA CTGGGCCGCC
TCGGATGTCG GCTGGGTGGT CGGCCACTCC TACATCGTGT ACGCACCGCT TCTCCTCGGC
GCGACAACCG TTCTCTACGA AGGCAAACCG GTCCACACCC CGGACGCCGG CGCGTTCTGG
CGGGTCGCCG CCGAGTACGG CGTGAAGGCG CTCTTCACCG CGCCGACGGC CATCCGCGCC
ATCAAGAAGG AAGATCCGCA GGGCCGCGAG ATCGGCCGCT ACGACCTGTC GAAACTCGAA
TACCTCTTTC AGGCCGGCGA GCGCCTCGAC CCGGACACCT ATCAGTGGGC GGCCGACAAG
CTGGGCATCC CGATCGTCGA CCACTGGTGG CAGACGGAGA CCGGGTGGGC CATCGCGGCC
GACCCGATGG GCGTCGAACC CATGCCGGTC AAGCCCGGGT CGGCGACGGT GCCCATGCCC
GGTTACGACG TCCGGATCCT GCACCCGGAT GGCTCGGAAT GCGGACCGAA CGAGGAGGGC
GCGATCTGTG TGAAGCTGCC GCTGCCTCCG GGCACGCTGC CGACGCTGTG GGGTGACGAC
GACCGCTATA TCGCCTCGTA TCTGCGCGCC TTCCCGGGTT ACTACCTGAC CGGTGACGGT
GGCTACGTCG ACGACGACGG CTATCTGTTC GTGATGGGCC GCACCGACGA CGTGATCAAC
GTGGCCGGCC ACCGGCTGTC CACCGGGTCG ATCGAAGCGG TGCTCGCCGC GCATCCGGCC
GTCGCGGAGT GCGCGGTGAT CGGGGTGGCC GACGAGATCA AGGGACAGGT GCCGCGCGGG
TTCGTGGTCC TCAAGAGCGG GGCCGACGCC CAGGGGCTCG AGGCCGAACT CGTCGCGGCC
GTACGCGACA ACATCGGCGC GGTGGCGTGC CTGAAGCAGG TCGACGTGGT TCACGCACTG
CCGAAGACCC GCTCGGGCAA GATCCTGCGC AAGACGATGC GCGGCCTCGC CGAAGGTCGT
GACGAACCGC TGCCCTCGAC AATCGAGGAC CCGGCAGTGC TCGACAAGCT GCATCCGGTG
CTGCGCGAGA AGAGGTAA
 
Protein sequence
MSGYRDLFRA SIDDPEKFWA EAARAVTWTR EPTRVLDDSN PPFYRWFPDG ELNTCANALD 
RHVEDGRGEQ AALIYDSPVT GVKGTYTYRE LLDQTARFAG ALRGLGVEKG DRVVIYLPMV
PEALIAMLAC ARLGAVHSVV FGGFAAHELA ARIDDARPTV VVSASCGVEP TRTIEYKPML
DAALEMAEHK PVGCVILQRE HHRCELTDGR DHDWTELVAG ADAVDPVPVA ATDPLYVLYT
SGTTGKPKGI VRDNGGHAVA LLWSMRNIYD TQPGDVYWAA SDVGWVVGHS YIVYAPLLLG
ATTVLYEGKP VHTPDAGAFW RVAAEYGVKA LFTAPTAIRA IKKEDPQGRE IGRYDLSKLE
YLFQAGERLD PDTYQWAADK LGIPIVDHWW QTETGWAIAA DPMGVEPMPV KPGSATVPMP
GYDVRILHPD GSECGPNEEG AICVKLPLPP GTLPTLWGDD DRYIASYLRA FPGYYLTGDG
GYVDDDGYLF VMGRTDDVIN VAGHRLSTGS IEAVLAAHPA VAECAVIGVA DEIKGQVPRG
FVVLKSGADA QGLEAELVAA VRDNIGAVAC LKQVDVVHAL PKTRSGKILR KTMRGLAEGR
DEPLPSTIED PAVLDKLHPV LREKR