Gene Mkms_4252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_4252 
Symbol 
ID4612192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp4478898 
End bp4479704 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content68% 
IMG OID639793936 
ProductM15D family D-Ala-D-Ala dipeptidase VanX 
Protein accessionYP_940234 
Protein GI119870282 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2173] D-alanyl-D-alanine dipeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.757483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.211431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAA CACTGAGGGG TGTGCTGGGG ATCGTGTCCG CCGCGGTGCT GGCGGCGGTG 
GCGGCGCCGG TCGCTTCGGC CCAGCCCGAA CCGACGGCCC CGGCGGACTT CGTCTCGCTC
ACCGACGTCG ACCCGTCGAT CCTGCTGGAC GTCCGCTACA TCACGCCGCA CAACTTCACC
GGTGATCCGG TCGACGGGTA CCGGGCGCCG CTGTGCCTGC TCACCCGGCC GGCGGCCGAG
GCGCTGCGGC GCGCGCAGCA GGAGTTCGTC GAACAGGGCT ACTCGCTGAA GGTCTACGAC
TGCTACCGGC CGCAGCGCGC CGTGAACGAT TTCGTGGCGT GGGCGAAGAA CCTTCCCGAC
CAGCGGATGA AGGCCGAGTT CTACCCCCGA GTGGACAAGA CGCAGCTGTT CGCCGACGGG
TACATCGCCG AGAACTCGGG GCACAGCCGC GGCAGCACCG TCGACCTCAC GCTGGTCGCG
TTGCCCGCCG AGGAGCAGCC GGCCTTCGTG CCGGGCCAGC CACTGGTCGA CTGCGCCGCA
CCGGTCGCGG AACGCTTCGG CGACGACACC ATCGACATGG GCACCGGTTA CGACTGCTTC
GACACCCTGG CGCACACGCT CGACCCGCGG ATCCAGGGTG AGCAGCTCAA GAACCGGCTG
CTGCTGAAGG ACGGACTCGA GAAGCAGGGG TTGGAGAACT ACGAGAACGA GTGGTGGCAC
TTCACGTTCA AACCCGAGAC GTATCCGGAC ACCTACTTCG ACTTCCCCGT CGACCCATCC
TCGCTGACGG GTTTAGGCCA CCGGTAG
 
Protein sequence
MPKTLRGVLG IVSAAVLAAV AAPVASAQPE PTAPADFVSL TDVDPSILLD VRYITPHNFT 
GDPVDGYRAP LCLLTRPAAE ALRRAQQEFV EQGYSLKVYD CYRPQRAVND FVAWAKNLPD
QRMKAEFYPR VDKTQLFADG YIAENSGHSR GSTVDLTLVA LPAEEQPAFV PGQPLVDCAA
PVAERFGDDT IDMGTGYDCF DTLAHTLDPR IQGEQLKNRL LLKDGLEKQG LENYENEWWH
FTFKPETYPD TYFDFPVDPS SLTGLGHR