| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_4232 |
|---|
| Symbol | |
|---|
| ID | 4612172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 4459310 |
|---|
| End bp | 4461007 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639793916 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_940214 |
|---|
| Protein GI | 119870262 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4425] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACA CCGCGCAGAC CGTCGAGGAG ACGCCTCCGC AGGAGACCCC ACCGCCGAAA
CGGGCCTGGT GGCTGCGGCA TTACACGTTC TTCGGCACGG CCACCGGCCT GGTGTTCGTG
TGGTTCTCGC TCACCCCGTC GCTGCTGCCG CGCGGTCCGC TGTTCCAGGG CCTGGTCAGC
GGCGGCGCCG GTGCGGCCGG CTACGCCATC GGCGTGTTCG CGGTGTGGCT CACGCGTTAC
ATGCTCTCCC GGGACACCAG CCCGCCTGCC CCGAAATGGG CGTGGGTGGC ACTGGTCGTG
GTGGGCGTCG TCGGCCAGGT GCTGATGATC GTGTACTTCC ACGTCTGGCA AGACCAGATC
CGCGATCTGA TGGGTGTGCC GCGGATGGGC TTCTGGGACC ATCCGTTGAC CGCGGTGCTG
GCGATCGTCG TGCTGTTCGC CCTCGTCGAG GTGGGTCAGC TGATCCGGCG TCTGGTCGTC
TTCCTGGTCC GGCAGCTCAA TCGTGTTGCC CCGCCGCGGG TCTCGGCGGT GGTCGTGGTG
GCTCTGCTGC TCGCGCTGTC GATCGCGCTG CTCAACGGCG TCGTGGTCCG CGGTCTGATG
AGCGCGATCA ACAACACGTT CGAGACGGTC AACGACGAGA CCGATCCCGA CACCCCCGCG
CCGGAGAGCC CGCTGCGTTC GGGTGGTCCG CAGTCGTTGG TCAGCTGGGA GTCACTCGGT
CACCAGGGCC GCGTCTTCGT CTCCGGGGGG CCGACGGTCG CCGAGCTCAG CGCCTTCAAC
GGTGCACCGG CGATCGAACC GATCCGCGCG TATGCCGGGC TCAATTCGGC CGACGGCATC
CGGGCGACGG CCCGGCTGGC CGCCGAGGAA CTGCTGCGCA CCGGCGGGCT GAACCGCGCG
GTCGTCGCGG TCGCCACCAC CACCGGCACG GGGTGGATCA ACGAGGCGGA GGCCTCGGCG
CTGGAGTACA TGTTCAACGG CGACACCGCG ATCGTGTCGA TGCAGTACTC GTTCCTGCCC
AGCTGGCTGT CGTTCCTCGT CGACAAGGAG AACGCCCGAC AGGCCGGACA GGCGTTGTTC
GAGGCGGTCG ACGCGTTGGT GCGGGAGATG CCCGAAGCCC AGCGCCCCCG CCTCGTCGTC
TTCGGTGAGA GCCTCGGATC CTTCGGCGGC GAGGCGCCGT TCCTCGCCCT CAACAACCTG
ATCGCGCGGA CCGACGGTGC GCTGTTCTCC GGGCCCACGT TCAACAACAC CATCTGGAAC
GAGCTGACCC GGCAGCGCGA TCCCGGCTCA CCGCAATGGC TGCCGATCTA CGACAGCGGG
GAGAACGTCC GGTTCGTCGC CCGCCCCGAC GACCTCGACC GGCCCGACCG GCCCTGGGGC
ACACCGCGGG TGGTGTACCT GCAGCACGCG TCCGACCCGA TCGCGTGGTG GAACCCCGAC
CTGTTGTTCG CCCGTCCGGA CTGGCTGAAG GAGCCGCCCG GTTACGACCG CACCGCCCGG
ATGAAGTGGA TACCGGTGGT GACGTTCCTG CAGGTGTCGG CGGATATGGC GGTGGCCGTC
GACGTCCCGG ACGGACACGG CCACGTCTAC GTCAGGGACG TCGTCAACGG GTGGGCGGCG
GTGCTCCAGC CGCCCGGGTG GACGCCGGAG AAGACCGAGC GGCTTCGGCC GGTGCTGCAC
TCCGACGAGA ACAGTTAG
|
|---|
| Protein sequence | MTDTAQTVEE TPPQETPPPK RAWWLRHYTF FGTATGLVFV WFSLTPSLLP RGPLFQGLVS
GGAGAAGYAI GVFAVWLTRY MLSRDTSPPA PKWAWVALVV VGVVGQVLMI VYFHVWQDQI
RDLMGVPRMG FWDHPLTAVL AIVVLFALVE VGQLIRRLVV FLVRQLNRVA PPRVSAVVVV
ALLLALSIAL LNGVVVRGLM SAINNTFETV NDETDPDTPA PESPLRSGGP QSLVSWESLG
HQGRVFVSGG PTVAELSAFN GAPAIEPIRA YAGLNSADGI RATARLAAEE LLRTGGLNRA
VVAVATTTGT GWINEAEASA LEYMFNGDTA IVSMQYSFLP SWLSFLVDKE NARQAGQALF
EAVDALVREM PEAQRPRLVV FGESLGSFGG EAPFLALNNL IARTDGALFS GPTFNNTIWN
ELTRQRDPGS PQWLPIYDSG ENVRFVARPD DLDRPDRPWG TPRVVYLQHA SDPIAWWNPD
LLFARPDWLK EPPGYDRTAR MKWIPVVTFL QVSADMAVAV DVPDGHGHVY VRDVVNGWAA
VLQPPGWTPE KTERLRPVLH SDENS
|
|---|
| |