| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_4100 |
|---|
| Symbol | |
|---|
| ID | 4612040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 4324612 |
|---|
| End bp | 4325568 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639793784 |
|---|
| Product | L-proline dehydrogenase |
|---|
| Protein accession | YP_940082 |
|---|
| Protein GI | 119870130 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0506] Proline dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.422146 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGCCT TCCAGCGCGT AGCACGTCCG GTGATCCTGG CGGCCGCCCG GTCGGACTCG
CTGCGGCACA CGGCGGAGCG GCTGCCGGTG ACACGGAATG TGGTGCACCG CTTCGTACCT
GGCGAAAGCG TCGAAGAGGC GATGTACTGC GTTACGGGAC TGCGGAACTC GGGCCGCATG
GTCAGCGTCG ACTACCTCGG CGAGGATGTG ACCGACGTCG ACACCGCGAA CGCGACCGTC
GAGGCGTACG TGAAACTGCT CGACGCACTT GGCCGCCGGG ACGAGCCGGC CGGTGCCGTC
AGGCCGCTGG AGGTGTCGCT GAAGCTCTCC GCGCTGGGTC AGGCGCTGCC GCGGGACGGC
GAGAAGATCG CACTGGAGAA CGCGCACACG ATCTGCACGC ACGCCCAACG CGTCGGTGCG
TGGGTGACCG TCGATGCCGA GGACCACACG ACCACCGACT CGACGCTGTC GATCGTGCGC
GAGTTGCGTT CGGAGTTCGA CTGGTTGGGC ACGGTGCTGC AGGCCTACCT GCGCCGCACG
CAGGCCGACT GTGCGGAGTT CGCCGCCTCC GGGGCGCGGA TCCGGTTGTG CAAGGGGGCG
TATGACGAAC CGGCTTCAGT GGCGTTCCGC GATGCGGACG AGGTCACGGA CAACTATCTG
CGCTGTCTGG AGACGCTGAT GGCAGGACGC GGGTATCCGA TGGTGGCGTC ACACGATCCG
GTGGTGATCG ACGCGGTGCC GGGGCTGGCG GCGGCGCAGG GACGGGCATC CGGGAGTTAC
GAATATCAGA TGCTGTACGG CATCCGTGAC CAGGAGCAGC AACGGCTGGC CGATGCCGGA
AACGTTGTTC GCGTGTATGT TCCGTTCGGC ACGCAGTGGT ATGGCTACTT CGTTCGCAGG
CTCGCCGAAC GGCCGGCAAA CATGGCGTTC TTCCTGAGAG CCCTGGCGGG TCGCTGA
|
|---|
| Protein sequence | MGAFQRVARP VILAAARSDS LRHTAERLPV TRNVVHRFVP GESVEEAMYC VTGLRNSGRM
VSVDYLGEDV TDVDTANATV EAYVKLLDAL GRRDEPAGAV RPLEVSLKLS ALGQALPRDG
EKIALENAHT ICTHAQRVGA WVTVDAEDHT TTDSTLSIVR ELRSEFDWLG TVLQAYLRRT
QADCAEFAAS GARIRLCKGA YDEPASVAFR DADEVTDNYL RCLETLMAGR GYPMVASHDP
VVIDAVPGLA AAQGRASGSY EYQMLYGIRD QEQQRLADAG NVVRVYVPFG TQWYGYFVRR
LAERPANMAF FLRALAGR
|
|---|
| |