Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_3974 |
Symbol | |
ID | 4611914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | + |
Start bp | 4189064 |
End bp | 4191049 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639793658 |
Product | stage II sporulation E family protein |
Protein accession | YP_939956 |
Protein GI | 119870004 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.135452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATCCTG ATCAGGGGGC GCTGGGAGAT CACCGGGTTC GCTCACGAAA ACCGGCCGTG GTGTTCGTCG TCGGGTGTCT GTTCGCCGTC CTCGTCGTCG GGTGGCTATC GCTGGTGACC CAGCCGACGG CGCTGGCCAG CACGGCGTGG TGGCCCGTCG CCGGGATCGC GGTCGGGTTG GGCATCCGCT TCCCGCGCCG TCAGGTGTGG GCGCCGGCCG CCGCCGTCGC CGCGATCACC CTTCCGCTCC TGCTCTGGGC GGGACGGCCC GCTGCGCTCG CGACCGCGCT CGCATTCGCC GTCGCCCTCG AGATGGTGAT CGCCACCCTC ATCCTCAGGG GGCGCCACGA TCGCCTGCCG AGCCTGTCGG AACCGCGCGA CCTCGGCCGG TTACTGGTGG CCGTCGCCTC GGCGGCGATC GTCTACGACG TGGTCGGCGC CGGCGCCACC TACCTGCTCG CCGATTCCAC CGAGGCGTGG ATCCGGTTCG TCACGTCCGC GCCGAAGCAC GCGGCCGGGA TGCTGCTGCT GGTCCCGCTG TTCATGCACC TGCCGCGCCG CCCCCGGCCT GCGGGTCCGG TCGAGACCGT CGCGCAGGTC GTGACGACCC TGGGCCTGGT CACCTTCGTG TTCGCGTTCA ACCCCGGAAT GCCGCTGTCC TTCCTCCCCT TCATGCCACT GGTGTGGGTG GCGATCCGAC TGACGACCCG GGAACTGATC CTGCTGATGC TGGCGATCGC CGTCATCGCC TCGGCCGGCA GCGCGTACGG CACCGGGCCG TTCGCGTTCA ACCTCCTCGC ACCGGAGGTG GGCAACCTCG TCCTGCAGGT CTTCGAGCTG TCGATGGTGG TCGTCTTCCT CTCGCTCTCG CTCGCGGTCG GCCACGAGCG GACCACCGCA CGGCGCCTCA ACGAGAGCGA GGAGTTGTTC CGCCGGATCT TCGAAACGTC GGTGGCCGGG ATGCTGATCG CCACCCGTGC CGCCACGGGA TGGAAGGTGT TGCGCGCCAA CGACTCCGCG GTGGCCATCA TCCCCGGTCT CGCCGACGCG TCGGCCGAGC TCACCGATCT GTTGGGCGAG GAGGCCACCG CCGCGCTCTC GGCGGAAGCC GACGCGCTCA CCGAGGGCAA CGCGCGCCTG ACGCTGACCA CCGGCACCGA GCGGATCCTC AACGTCAGCA TCTCCCCGAT CAGCGTCGAC GGGGACAGCA GGACCCTCGC GCTGCAGTTC TACGACATCA CCGAGGCGAT GCGCGCCCGC AGGCTGGAAC AGGAGGAACT CGAGCGCGCC GCCGAAGTGC AACGTGCCCT CCTGCCCGGG ACGCTCCCAC CCACCCCCGG GTGGACTTCC GGTGCGGCTT CGGTGCCGGC CAGACAGGTC GGCGGGGACT TCTACGACAT CCGGGTCCAG GTCCCGCACG TGGTCCTCAG CCTCGGCGAC GTCATGGGTA AGGGCATGGG CGCGGGAATG TTGGCCGCCG CGACCAGAGC CGCGCTGCGC GCCACCGACC CCGAGCTCAG TCCATCGGCC GCCGTGAGCC ACATGGCCGG GGTCGTCGAT CACGACCTGC AACGCACCAG CGCCTTCATC ACGCTGACCT ACGTCCTCGT CGACCTCGTC ACCGGCGACT TCCGCGTCGC CGACGCCGGG CACGGACTGC ACTTCGTCGT CCGGACCGGA TCGGGTCTGG TGGAGCGCAC CGCCTCCAGC GATATGCCGG TGGGGCTCGA CAGCGGCTGG GGCGAGAAGC GCGGAGCGCT CCAGCCCGGC GACGCGATCC TCCTCGTCAG CGACGGCGTG ATGGACCTGT GGGGCGGCTC CGTCGAAGAG CTGTCGGATG CCGTGGCACA GTGCGCCCGG CAGCACGGCA CGAGCCCGCA GGCGTTGGTC GACGCCCTGT GCGCGCGGGC GAACGGTGAT CTGGACCGCG ATGATGTGAC GGCCGTCGTC CTGCGGCGGG AACCGGTGGA CGTGGCGGCA CGCTGA
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Protein sequence | MDPDQGALGD HRVRSRKPAV VFVVGCLFAV LVVGWLSLVT QPTALASTAW WPVAGIAVGL GIRFPRRQVW APAAAVAAIT LPLLLWAGRP AALATALAFA VALEMVIATL ILRGRHDRLP SLSEPRDLGR LLVAVASAAI VYDVVGAGAT YLLADSTEAW IRFVTSAPKH AAGMLLLVPL FMHLPRRPRP AGPVETVAQV VTTLGLVTFV FAFNPGMPLS FLPFMPLVWV AIRLTTRELI LLMLAIAVIA SAGSAYGTGP FAFNLLAPEV GNLVLQVFEL SMVVVFLSLS LAVGHERTTA RRLNESEELF RRIFETSVAG MLIATRAATG WKVLRANDSA VAIIPGLADA SAELTDLLGE EATAALSAEA DALTEGNARL TLTTGTERIL NVSISPISVD GDSRTLALQF YDITEAMRAR RLEQEELERA AEVQRALLPG TLPPTPGWTS GAASVPARQV GGDFYDIRVQ VPHVVLSLGD VMGKGMGAGM LAAATRAALR ATDPELSPSA AVSHMAGVVD HDLQRTSAFI TLTYVLVDLV TGDFRVADAG HGLHFVVRTG SGLVERTASS DMPVGLDSGW GEKRGALQPG DAILLVSDGV MDLWGGSVEE LSDAVAQCAR QHGTSPQALV DALCARANGD LDRDDVTAVV LRREPVDVAA R
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