Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_3971 |
Symbol | |
ID | 4611910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | - |
Start bp | 4184282 |
End bp | 4185706 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639793654 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_939953 |
Protein GI | 119870001 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGCCC ACCCCGCCGG CCCCCGGCAC GCCGAGGAGA TCCACCACGG CGGCGCGCCA CCGCGTCCCG CCGGACCCGA CGAGGTCCTG CGGCTGGCCC CGAATGTGTG GCCGCGCAAC GCCGTTCGCG GCGCCGACGG TGTCGTGTCG ATCGCCGGGG TGCCCGTCAC CGACATCGCG GCCCAGTTCG GCACGCCGGT TTTCATCATC GACGAGGCCG ACTTCCGCTC GCGCTGCCGG GAGATCTCCG CCGCGTTCGG TGGCGGCGAG TACGTGCGCT ACGCCGCAAA GGCTTTCCTG TGCACCGAGG TGGCGCGCTG GATCGACGAG GAGGGGCTCG CCCTCGACGT CGCCAGTGGC GGAGAACTCG CGGTCGCGTT GCACGCCGGC TTCCCGGCCG AGCGGATCGC GTTGCACGGC AACAACAAAT CGCCGGACGA ACTGGCGCTG GCCGTGAAGT CCGGCGTGGG CCACGTGGTG GTCGACTCGA TGATCGAGAT CGAACGCCTC GACGAGATCG CCGCCGCGGC GGGCGTGGTC CAGGACGTGC TGGTGCGGGT GACCGTCGGC GTCGAAGCCC ATACGCACGA GTTCATCTCG ACCGCGCACG AGGACCAGAA GTTCGGGCTC TCGCTGGCCA GCGGGGCCGC GATGGCCGCC GTGCGCCGCG TGTTCGAGAC CGACAACCTG CGGTTGGTCG GCCTGCACAG CCACATCGGC TCGCAGATCT TCGACGTCGC GGGGTTCGAG CTCGCCGCGC ACCGCGTGAT CGGCCTGCTG CGCGATGTCG TCGCCGAATT CGGGGTGGAC AAGACCGCCC AGATGTCCAC CGTCGACCTC GGTGGTGGCC TCGGCATCTC CTATCTGCCG CAGGACGATC CGCCGCCGGT CGCCGACCTC GCCGCCAAGC TGAGCGCCAT CGTGCGCGAG GAGTCGGCAG CCGTCGGGCT GCCCACCCCG AAACTCGTGG TCGAGCCGGG CCGGGCGATC GCCGGGCCGG GCACGATCAC GCTCTACGAG GTCGGCACCG TCAAGGACGT GGCCGTGGCG TCGGACAGGT ACCGCCGCTA CGTCAGCGTC GACGGCGGGA TGAGCGACAA CATCCGCACC TCGCTCTACG GCGCCGAATA CGACGTCCGG TTGGTCTCCC GGGTCAGCGA CGCCGACCCC GCACTGAGCC GCGTGGTCGG AAAGCACTGC GAGAGCGGCG ACATCGTGGT CCGGGACGCC TGGCTCTCCG GTGATGTGGC ACCGGGCGAT CTGCTCGGGG TGGCCGCGAC CGGCGCCTAC TGCTATTCGA TGTCGAGCCG TTACAACCTG ATCGGCCGCC CCGCGGTGGT GGCGGTGCGC GACGGGCACG CGCGCCTGAT CCTGCGCCGC GAGACGGTCG ACGATCTGTT GAGTCTGGAA GTGAGTGGTC AATGA
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Protein sequence | MNAHPAGPRH AEEIHHGGAP PRPAGPDEVL RLAPNVWPRN AVRGADGVVS IAGVPVTDIA AQFGTPVFII DEADFRSRCR EISAAFGGGE YVRYAAKAFL CTEVARWIDE EGLALDVASG GELAVALHAG FPAERIALHG NNKSPDELAL AVKSGVGHVV VDSMIEIERL DEIAAAAGVV QDVLVRVTVG VEAHTHEFIS TAHEDQKFGL SLASGAAMAA VRRVFETDNL RLVGLHSHIG SQIFDVAGFE LAAHRVIGLL RDVVAEFGVD KTAQMSTVDL GGGLGISYLP QDDPPPVADL AAKLSAIVRE ESAAVGLPTP KLVVEPGRAI AGPGTITLYE VGTVKDVAVA SDRYRRYVSV DGGMSDNIRT SLYGAEYDVR LVSRVSDADP ALSRVVGKHC ESGDIVVRDA WLSGDVAPGD LLGVAATGAY CYSMSSRYNL IGRPAVVAVR DGHARLILRR ETVDDLLSLE VSGQ
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