Gene Mkms_3857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3857 
Symbol 
ID4611792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp4072248 
End bp4074029 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content69% 
IMG OID639793537 
Product3-ketosteroid-delta-1-dehydrogenase 
Protein accessionYP_939840 
Protein GI119869888 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.89705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTTCG ACAGGCACGT CGACGTGCTG GTGGTCGGCT CGGGCGGCGG CGGGATGACC 
GCCGCGTTGA CAGCTCACTC GTGCGGGCTG GACACGCTGG TGGTCGAGAA GGCCGCGCAC
TTCGGCGGAT CGACCGCGCT CTCGGGCGGC GGGATCTGGG TGCCGGGTGC GCCGTCGCAG
CGCAAGGCCG GCTACACACC CGACCCGGAC GCGGTCTTCG GGTATCTCAA GCAGATCACC
GGGGGGCTGG TCAGCGATGC GCGCCTGCGC ACCTACGTCG ACGCCGCCCC GCAGATGATG
GAGTTCCTCG AGAACCTCAG CCCGTGGTTC GAATTCGTCT GGAAGCCCGG CTACGCCGAC
TACTACCCGG AACTGCCGGG CGGCTCCGAA CTCGGCAGCA CGATCAACGT GCCGGCCATC
GACCTGCGCC GGCTCGAGGA GGACGAACAG CACCTGCTCC AGCCGTTGGC GCTGGCGCCG
AAGGGAATCT GGTTCGCGCC CAAGGACCTT CGCCTCTTCT ATCAGGTGCG GCAGAACTGG
CGCGGTAAGG CCGTCCTGGT CAAGCTGATC TGGCGGATGG TGCGGGCGCG GGTGTTCGGC
GACCGGATGG CCGCCATCGG CCAGTCCCTG GCCGCGCGGA TGCGGCTGGC CATGAAGCAG
GAGAACATCC CGCTGTGGCT CGACGCACCG ATGACCGAGT TGATCACCGG TCCCGACGGC
GAGGTGGTCG GTGCGGTCGT CGAGACGGAC GGGCGCGCGG TCCGGATCGG CGCGCGCCGC
GGCGTCATCC TGGCCGCCGG CGGCTTCGAC CACGACATGG ACTGGCGCAG AGAGCATCTG
CCGGTTCTGG AGAAGGACTG GAGCTTCGGT AACCCGGCCA ACCTGGGCGA CGGTATCCGC
GCGGCCGAGA AGGTCGGCGC CGCAACCGAA CTGCTCGACG AGGCGTGGTG GTTCCCGGCG
ATGTGCTGGC CCGACGGGCG GCTGCAGTTC ATGCTCAACG AACGCATGAT GCCCGCGCAG
TTCGTCGTCA ACGGCGACGG GAAGCGCTTC ATCAACGAGG CCGCACCGTA CATGGATTTC
GCGCACGCGA TGATCGACGG CCAGCGGTCC GGTGTGGAGC ACATCCCGTG CTGGCTGATC
ACCGACATCC GGTCGTTCCA CCGCTATGTG GTGGGCGGGC ACCTGCCCAT CCCGAAGGTG
CCCTTCGCGC CGGTGCCCAC CGGGTGGAAG GTGCCCAAGG CCTGGCTGGA TTCCGGGGTG
GTCAAGGAAG CCCACTCGTG GGACGAGATG GCCGCCAAGA TCGGCGTGCC TGCCGAGAAC
CTGCGCCGGA CCGCCGAACG GTTCAACGAG CTCGCGCGCA AGGGACACGA CGACGACTTC
AACCGCGGCG ACAGCGCGTA CGACAACTAC TACGGCGACC CGACGCTGCC GAACCCCAAC
CTTCACCCGC TGGGCAAGCC GCCGTACTAC GCGTTCCAGA TCATCCTCGG TGACCTCGGC
ACATCGGGCG GCCTGCGCAC CGACGAGTAC GCCCGGGTGC TGCGCGACGA CGATTCGGCG
GTGCCCGGCC TGTACGCGGT GGGCAACAAC TCGGCCGCCG TGATGGGCCG CAGCTACGCC
GGTGCGGGCG CGACGATCGG GCCCGCCATG ACGTTCGGCT ACGTCGCCGC CAGACACATC
GCGGCGAAAG ACGCCGCCGC GCAGCCGGAT TCCGGCACCG CGCACGTCGA CCACCAAGCT
CAACCCAGTC CAGGGCCGTC ACCCATCGGA GGAAGCACAT GA
 
Protein sequence
MNFDRHVDVL VVGSGGGGMT AALTAHSCGL DTLVVEKAAH FGGSTALSGG GIWVPGAPSQ 
RKAGYTPDPD AVFGYLKQIT GGLVSDARLR TYVDAAPQMM EFLENLSPWF EFVWKPGYAD
YYPELPGGSE LGSTINVPAI DLRRLEEDEQ HLLQPLALAP KGIWFAPKDL RLFYQVRQNW
RGKAVLVKLI WRMVRARVFG DRMAAIGQSL AARMRLAMKQ ENIPLWLDAP MTELITGPDG
EVVGAVVETD GRAVRIGARR GVILAAGGFD HDMDWRREHL PVLEKDWSFG NPANLGDGIR
AAEKVGAATE LLDEAWWFPA MCWPDGRLQF MLNERMMPAQ FVVNGDGKRF INEAAPYMDF
AHAMIDGQRS GVEHIPCWLI TDIRSFHRYV VGGHLPIPKV PFAPVPTGWK VPKAWLDSGV
VKEAHSWDEM AAKIGVPAEN LRRTAERFNE LARKGHDDDF NRGDSAYDNY YGDPTLPNPN
LHPLGKPPYY AFQIILGDLG TSGGLRTDEY ARVLRDDDSA VPGLYAVGNN SAAVMGRSYA
GAGATIGPAM TFGYVAARHI AAKDAAAQPD SGTAHVDHQA QPSPGPSPIG GST