Gene Mkms_3815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3815 
Symbol 
ID4611750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp4029020 
End bp4030228 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content69% 
IMG OID639793495 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_939798 
Protein GI119869846 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.313737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCC TCCCTCCGCT GGCCGGCATC ACCGTCGTGA CGCTGGAACA GGCGGTGTCC 
GCACCGATGT GCACGCGCGT ACTCGCCGAC TTCGGTGCCC GGGTGATCAA GATCGAGAAC
CCCAAGGGCG GTGACTTCGC CCGCCACTAC GACGACGTGG TCCACGGTCA GGCTGCCCAC
TTCGTCTGGG CCAACCGCGG CAAGGAGTCG CTGAGCCTCG ACCTGAAATC GCCCGCGGGC
ATGGACATCC TGCACCGGCT GCTCGACGGC GCCGACGTGC TGGTGTCCAA CCTCGCCCCC
GGCGCGACGG CCCGGATGGG CATCGGCGCC GCCGACCTCA AACACCGGCA TCCGCGGGTG
ATCCCGGTCG AGATCGACGG GTACGGCGCC GGCGGGCCGA TCTCGCACAA GCGCGCCTAC
GATCTGCTGA TCCAGGCCGA ATCGGGTGCG TGTGCGGTCA CCGGTTACCC GGGGATGCCG
GCCAAACCCG GTCCACCGGT GGCCGACATC TCGACCGGGC TGTACGCCGC GCTGTCCATC
CTGGCGCTGC TGTATGCGCG CAAGGGGGAC GGCGCCGAAC CGGCCCCCGC GGTCGCGGTC
AGCCTGTTCG ACACCATGAC CGACATCATG GGTTACCAGC TGACCTACAC CCAGCACTCC
GGTGTCGACC AGCAACCGCT GGGGATGAGC TCGCCGGCGG TCGCGCCCTA CGGCGCCTTT
CCGACCAGGG ACGGGCAGAC GGTGGTGCTG GGCACCACCA ACGACCGGGA GTGGCAGCGG
CTGGCTCGGG AGATCATCGA GCGCCGGGAC CTGGCCGACG ATCCGATGTT CGCGAGCAAC
TCCGACCGGT GCGCACACCG CGACATCCTC AACGAGGCGA TCGGATCCTG GTGTGCGCAA
CACGATCTCG CGCACATCCA GAAGAAGGCC GACGACGCCG GTATCGGCAA CTCCCGCTAC
AACCTGCCGA GTGAGGTCGT CGCCCACCCG CATCTGACCG CCCGCGACCG CTGGCGGCCG
GTCGAGACGC CCAACGGCGA GATCTCCGCG CTGCTGCCGC CCCCGGTGAT CGAGGGGTTC
GAACAACCCA TGGGAGCGGT GCCCGGACTC GGTCAGCACA CCGACGAGAT ACTGGGCGGG
CTGGGCCTGT CCGCCGACGA GATCGCCGCG CTGCGTGAGC AGGGCGCGGT CGGTCCGGCA
CAGTCATAG
 
Protein sequence
MQTLPPLAGI TVVTLEQAVS APMCTRVLAD FGARVIKIEN PKGGDFARHY DDVVHGQAAH 
FVWANRGKES LSLDLKSPAG MDILHRLLDG ADVLVSNLAP GATARMGIGA ADLKHRHPRV
IPVEIDGYGA GGPISHKRAY DLLIQAESGA CAVTGYPGMP AKPGPPVADI STGLYAALSI
LALLYARKGD GAEPAPAVAV SLFDTMTDIM GYQLTYTQHS GVDQQPLGMS SPAVAPYGAF
PTRDGQTVVL GTTNDREWQR LAREIIERRD LADDPMFASN SDRCAHRDIL NEAIGSWCAQ
HDLAHIQKKA DDAGIGNSRY NLPSEVVAHP HLTARDRWRP VETPNGEISA LLPPPVIEGF
EQPMGAVPGL GQHTDEILGG LGLSADEIAA LREQGAVGPA QS