| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_3804 |
|---|
| Symbol | |
|---|
| ID | 4611739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 4018411 |
|---|
| End bp | 4019367 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639793484 |
|---|
| Product | luciferase family protein |
|---|
| Protein accession | YP_939787 |
|---|
| Protein GI | 119869835 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03564] F420-dependent oxidoreductase, MSMEG_4879 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0754765 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATCG GGTTGATGGT CGGCTCCGAC CGGGAACGCA CACGTGCGGA CCGGTTGGAC
GGGCTGCTCG ACGACGGGCG GGCCGCCGAG GCGCAGGGGT TCGCGTCGTT CTGGTTCCCA
CAGGTGCCCG GTTATCTCGA CGCGATGACC GCGGTCGCAC TGCTCGGCCG CGTCACCGAA
CGCATCGAGA TCGGCACCGC AGTCGTGCCC ATCCAGACGC GGCACCCGCT CGTCATGGCA
CAACAGGCGG CCACGACCCA GGCGGCCTGC GGCGGACGAT TCACCCTGGG GATCGGCCCA
TCTCACGACT GGATCATCTC CGGGCAGCTG GGGCTGCCCT ACGACCGGCC TGCCCGACTG
GTGCGCGACC ATCTCGACGT CCTCGGCGCG TCGCTGTCCG GTGCGGGTCC GGTCGACGTG
GACAACGACA GCTACCGCGT GCACGGCTCG ATCGACGTCA CCGACTACGA GGTTCCGGTA
CTGCTCGCCG CACTGGGCCC GGTGATGCTG CGCCTGGCCG GTGAGCGTGC GGGCGGCACC
ATCCTCTGGA TGGCCGACGA GCGGGCGATC GAGAGCCATA TCGCTCCCCG CCTCACCGCC
GCCGCGTGCG CCGCGGGTCG CCCGGCGCCG CGCATCGTGG CCGGTGTCCC GGTCGCCCTG
TGCTCACCAG GAGAGGTCGA CGACGCTCGC GCTCATGCCG GCGAGGTGCT CGGCCACGCG
GAACTGTCGC CCAACTACCT TCGGCTGCTC GAGCACGGCG ACGCCGACGA CGTCGGCGAC
ACCATGGCCG CGGGAGACGA GGCGTCGGTT CGCGCCCGGT TCCGGCGCTA CCGAGATGCG
GGTGTGACAG ACCTGGCCGC GCGCGTGATC CCACTCGGTG AGGACGCCGC CGCGCGGCGG
GACTCCCGTT GCCGTACAAA GGATTTCGTG GCATCACTGT GCGCGGAGTT CGGTTGA
|
|---|
| Protein sequence | MRIGLMVGSD RERTRADRLD GLLDDGRAAE AQGFASFWFP QVPGYLDAMT AVALLGRVTE
RIEIGTAVVP IQTRHPLVMA QQAATTQAAC GGRFTLGIGP SHDWIISGQL GLPYDRPARL
VRDHLDVLGA SLSGAGPVDV DNDSYRVHGS IDVTDYEVPV LLAALGPVML RLAGERAGGT
ILWMADERAI ESHIAPRLTA AACAAGRPAP RIVAGVPVAL CSPGEVDDAR AHAGEVLGHA
ELSPNYLRLL EHGDADDVGD TMAAGDEASV RARFRRYRDA GVTDLAARVI PLGEDAAARR
DSRCRTKDFV ASLCAEFG
|
|---|
| |