| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_3793 |
|---|
| Symbol | |
|---|
| ID | 4611728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 4007211 |
|---|
| End bp | 4008176 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639793473 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_939776 |
|---|
| Protein GI | 119869824 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.338369 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.128891 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCCACC GTAATGCTCG TACGACGTTT CATGGTCGGC TGTTGATGGT GCGCCGCCAT
CAGGCCGGTT GGCCCAAGGC TCATATCGCC AGTGCGATGG GGGTGTCACG CAAGTGCGTG
CACACCTGGA TCAGCCGGTT CGAGGCCGAC GGCGAGGCCG GGCGGATCGA CCGCTCCTCG
CGGCCCCACA CCTCGCCAAT GCGCACCGCG CAGCGGCTGG AGAACCAAAT CGTGGCCTGG
CGGCGCCGTC ACCGTTGCGG CCCGGAGGAA ATCGGCGCGA AGTTGGGGGT GTCGGCTCGG
ACAGTGTCCC GGGTATTGCA CCGCCGTGGT GCGCCCTACC TGCGGGATTG CGATCCGATG
ACCGGACAGG TCATCCGCGC CTCAAAGTCC ACGGCGGTGC GTTATGAGCG CGGCCGACCC
GGCGAACTGG TCCACATGGA CGTTAAGAAA TTGGGCCGTA TCCCTGACGG CGGTGGCTGG
CGAGCCCACG GTCGAGGCTG TGCACCTGAC CGCAAGCGGT TGCGCGGCAA TGGATTCGAC
TACATCCACT CACTTGTCGA CGATCACAGC CGGCTGGCGT ACTCCGAAAT CCTGCCCGAC
GAGAAAGGCT CCACCTGCGC CGGGTTCCTC GAACGCGCAG CCCACTACTT CCGCGCCCAC
GGCATCACCA CCATCGAGCA GGTCATGACC GACAACGCCT GGGCCTACCG GTATTCCCTG
CGCGATGTCT GCACCCAGCT CGGTGCCCGC CAAATCTTCA TCAGGCCCCA CTGCCCCTGG
CAGAACGGCA AGGTAGAGCG GCTCAACCGA ACCCTGCAGA CCGAATGGGC CTACAAGCGG
GTCTTCACCT CCAATGCCCA CCGCGCCGCC GCGCTTGCGC CCTGGCTCAA GCACTACAAC
ACTCAACGCC GTCACAGTGC ACTCGGCGGC CTCCCACCGA TCAGCCGACT GACACCAACC
TCATGA
|
|---|
| Protein sequence | MSHRNARTTF HGRLLMVRRH QAGWPKAHIA SAMGVSRKCV HTWISRFEAD GEAGRIDRSS
RPHTSPMRTA QRLENQIVAW RRRHRCGPEE IGAKLGVSAR TVSRVLHRRG APYLRDCDPM
TGQVIRASKS TAVRYERGRP GELVHMDVKK LGRIPDGGGW RAHGRGCAPD RKRLRGNGFD
YIHSLVDDHS RLAYSEILPD EKGSTCAGFL ERAAHYFRAH GITTIEQVMT DNAWAYRYSL
RDVCTQLGAR QIFIRPHCPW QNGKVERLNR TLQTEWAYKR VFTSNAHRAA ALAPWLKHYN
TQRRHSALGG LPPISRLTPT S
|
|---|
| |