Gene Mkms_3780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3780 
Symbol 
ID4611715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3995472 
End bp3996002 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content69% 
IMG OID639793460 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_939763 
Protein GI119869811 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.422655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.467747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGTC TGACGCCGCT CCCGCCCGAC CGCTGGGACG ACGACGTCCG GCGGGCGTTG 
AGCCCGTTGC TCGGCGCCGA CCGGGCGAAC CCACGCGATG CGGGCAACGT GCTGGCCACG
CTCGTCCGGC ACCAACCGCT CACCCGCGCC TATCTGGAGT TCAACGCCTA CCTCCTGCGG
GAGTCGACGC TGACCCCTCG GATCAGGGAG GTGGCGCTGA TGCGCGCGGT GTTGTGGCGG
CGGTGCGACT ACCTGTGGGA CCACCACGTC GTCCTCGCGC AGCGCGCCGG TCTGACGGTC
GATGAGATAG CCGGCATCCG CAGCGGCGCC ATGGGCGACG GGCTGGACGG GCTGGTGATC
AGGGTGGTCG ACGAACTCGA GTCGGACAGC ACGATCTCCG ACGACACCTG GGCCGCGCTG
GGCGGTCACC TCGACGACCG CCAATGCATG GACCTGGTGT TCACGATCGG CGGATACCAA
TTGCTCGCGG TGGCGGTGAA CGCCTTCGGC ATCGAGCCCG AGGACGTGTG A
 
Protein sequence
MTRLTPLPPD RWDDDVRRAL SPLLGADRAN PRDAGNVLAT LVRHQPLTRA YLEFNAYLLR 
ESTLTPRIRE VALMRAVLWR RCDYLWDHHV VLAQRAGLTV DEIAGIRSGA MGDGLDGLVI
RVVDELESDS TISDDTWAAL GGHLDDRQCM DLVFTIGGYQ LLAVAVNAFG IEPEDV