| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_3750 |
|---|
| Symbol | |
|---|
| ID | 4611685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 3970149 |
|---|
| End bp | 3970850 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639793430 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_939733 |
|---|
| Protein GI | 119869781 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.8736 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.785854 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGACCG CCGTGGTCAC CGGCGGAGGG TCGGGTATCG GACTGGCCAT CGTGCAGCGG
CTGCAGGCCG ACGGGCTCCA CGTCGCCACG ATCGATCTCA AACCGGGCGA CGGCGAGTTC
GCCCACGCCG CCGACGTGAC CGACCGGTCC GCGGTCGAGG CCGCCTTCAC CGCGATCCGC
AAACAGCTCG GTCCGATCAC CGTGCTCGTC AACGCCGCCG GGCTGGACTG CTTCAAACGC
TTCAGCGACG TGAACTTCGA CCGCTGGCAG AAGGTCATCG ACGTCAACCT CAACGGCGTC
TTCCACACCA TCCAGGCCGT GCTGCCCGAC ATGCTCGAGG CGGGGTGGGG CCGCATCGTC
AACATCTCGT CGTCGAGCAC CCACTCGGGC GCCCCGTACA TGTCGCCGTA CGTGGCCGCC
AAGTCGGCGG TCAACGGCCT GACGAAATCG CTTGCGCTGG AATACGGGCC GAGCGGTATC
ACGGTCAACG CCGTACCGCC CGGCTTCATC GACACCCCGA TGCTGCGCGC CGCCGCCGAG
CGCGGCTACC TCGGCGACAT CGACGCCACG ATCGCCGCCA CCCCGGTGCG GCGCATGGGC
AGACCAGAGG ACATCGCCGC CGCCTGCGCG TTCCTCATCA GCGAGGAGGC CGGCTACATC
ACCGGCCAGA TCCTCGGCGT CAACGGCGGC CGTAACACCT GA
|
|---|
| Protein sequence | MKTAVVTGGG SGIGLAIVQR LQADGLHVAT IDLKPGDGEF AHAADVTDRS AVEAAFTAIR
KQLGPITVLV NAAGLDCFKR FSDVNFDRWQ KVIDVNLNGV FHTIQAVLPD MLEAGWGRIV
NISSSSTHSG APYMSPYVAA KSAVNGLTKS LALEYGPSGI TVNAVPPGFI DTPMLRAAAE
RGYLGDIDAT IAATPVRRMG RPEDIAAACA FLISEEAGYI TGQILGVNGG RNT
|
|---|
| |