Gene Mkms_3660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3660 
Symbol 
ID4611592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3857146 
End bp3858732 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content70% 
IMG OID639793338 
Producthypothetical protein 
Protein accessionYP_939644 
Protein GI119869692 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5434] Endopolygalacturonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.805828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.518732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTTGT CGAGGCGGGA ACTGCTGGCA CGCACGTCCG CCGCGGCCGC CTCGGCCCTG 
CTCGCGGGCT GCTCGACGAA CGGCCCGCGC ACCGTCGTCG ACGTCCGCGC CCACGGCGCC
ACCGGTGACG GGATCACCGA TGACTCCCGG GCGGTCCAGG CGGCTGCAGC CGCACTGCGC
CCGGGGAGCA CCCTTCGGTT CTCCAGGGGG ACATACCGAT TCGCACAGCG TTGGCCGCCC
GGCGGGGCCG CGGTCGTCAT CTCGGGTTTG GCCGATGTCC GCGTCGAATT CGATCCGGGC
GCGGAGCTGT ACATGGACAA CCTGCATCCG ACGAAGCACA CCGGGAGCAG TCACGGCCTG
CTCGTCCGCG GTCCGGCGTC CCGAATCCAC CTGCGGGGAC TGAACATCCG GTGGGCAGAC
GGCGCACGGC GCTCACTCGG TGACGGCATC CGGGTGGAGG GCTTTCCCGA TCTGGACGGC
GCACAACCGA AGGGCTGGTC CGGGCAGTCC AGGCCGGTCA CCGAGGTGAC CGTCTCCGAC
TGCACCGTGA GGTCGAGCCC GCAGACCGGG GTGGTCATGA TGGGTGTCTC CGACATCGAG
GTGACGGGGC TGCGGGTGAC CGACAGCGGC GCGGACGGAC TCCACTTCAA CGCCTGCCGG
CGCGCGACGG TGACCGAGTA CAGCGCGGTG AACACCGGCG ACGACGGGCT CGCGCTGGTG
ACGTACTTCG AAGCCGAGCC GACTTTCGAT CCTGCCGCGC ACACCTTTTC GTTGCCGGAG
CTGACCGACT GGTCGAACGC GGACTTCACC GTCGAGAACG TCAACGTGTT CGGCTGCCGG
GCGAACGGGG TACGGCTCGC GGGTGCCCAC CGCGTCACCG TCGAGGGTCT CGACGTCGTC
GGCGTCCATG CCGGTTCGGC GTTTCTCATC GACTCCGCGG AACCGGGCAC CGACGTCGGG
TGGCACTACG TCGCCAGCCG TGCGGTCCGC CTCGACGACG TCACCGCGAC CGACTGCGAC
ATGGGGATCC ATCTGCTGGC CCGGCCTGGC ACGTCCGGGG ACCCGCGCTT CACCGACTTC
GACATCCACG TCGGCGACGC GACGATCGAC GATTGCCCCA CCTGGGCGGT CCGCGCCGAG
TCGCTGACGG ACACGCGGGT CAACGGCATG CGCATCGACA ACTGCAGCGT CACGACCGCC
TCCACGACGG GCGGCAACGG CGGCGTGGGC GTCGGCGATG CGAACGGAAT CACGTTCGGC
ATCATGACGA TACGCCACGC CGAACCGGTC ATCGCATTTC AGACCGTGAA CGCCGGAGCG
CTCACCGTCG AGAAGCTCGG CGTGGCGATC ACGCGACGGG ACCGGCCCGA GGGGAAGCTC
GATCCCTGTG TCCGGCTCGA CAATTCCGAC GGCGTCATCG ATCAGCTGAC CATCGGCTGG
CCGGCCGCCG GCGACGGGTG GGTGCCAGTC CGTCTCTCCG AACCCGGGCC GTGCGAGGAC
GACATCGGCG AAACGCCGCT CGCCATCCGC GGCCTGACGG TCACGCCGCC GGTCGAGCGT
CCTTCGGCGG TCGTATGCGG GCGGTGA
 
Protein sequence
MTLSRRELLA RTSAAAASAL LAGCSTNGPR TVVDVRAHGA TGDGITDDSR AVQAAAAALR 
PGSTLRFSRG TYRFAQRWPP GGAAVVISGL ADVRVEFDPG AELYMDNLHP TKHTGSSHGL
LVRGPASRIH LRGLNIRWAD GARRSLGDGI RVEGFPDLDG AQPKGWSGQS RPVTEVTVSD
CTVRSSPQTG VVMMGVSDIE VTGLRVTDSG ADGLHFNACR RATVTEYSAV NTGDDGLALV
TYFEAEPTFD PAAHTFSLPE LTDWSNADFT VENVNVFGCR ANGVRLAGAH RVTVEGLDVV
GVHAGSAFLI DSAEPGTDVG WHYVASRAVR LDDVTATDCD MGIHLLARPG TSGDPRFTDF
DIHVGDATID DCPTWAVRAE SLTDTRVNGM RIDNCSVTTA STTGGNGGVG VGDANGITFG
IMTIRHAEPV IAFQTVNAGA LTVEKLGVAI TRRDRPEGKL DPCVRLDNSD GVIDQLTIGW
PAAGDGWVPV RLSEPGPCED DIGETPLAIR GLTVTPPVER PSAVVCGR