Gene Mkms_3650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3650 
Symbol 
ID4611580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3844020 
End bp3844667 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content65% 
IMG OID639793326 
ProductATP-dependent Clp protease proteolytic subunit 
Protein accessionYP_939634 
Protein GI119869682 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.566554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.273141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACC AGACCGATCC CCGCCTCCAG CCGCAGGCGC GCTACATCCT GCCGTCGTTC 
ATCGAGCACT CGAGCTTCGG CGTCAAGGAA TCCAACCCGT ACAACAAGCT CTTCGAGGAA
CGCATCATCT TCCTCGGCGT GCAGGTGGAC GACGCGTCGG CGAACGACAT CATGGCCCAG
CTGCTGGTCC TCGAGTCGCT CGATCCCGAC CGCGACATCA CCATGTACAT CAACTCGCCC
GGTGGCTCCT TCACGAGCCT GATGGCGATC TACGACACCA TGCAGTACGT GCGCGCGGAC
ATCCAGACGG TGTGCCTGGG CCAGGCCGCC TCGGCCGCCG CGGTGCTGCT GGCCGCCGGC
ACACCCGGTA AGCGGCTCGC GCTGCCGAAC GCCCGGATCC TCATCCACCA GCCCGCGCTG
TCCGGCGTGA TCCAGGGTCA GTTCTCCGAT CTGGAGATCC AGGCCAAGGA GATCGAGCGG
ATGCGCACGC TGATGGAGGT CACCCTGGCG CGGCACACCG GCAAGGACCC CGAGACGATC
CGCAAGGACA CCGATCGCGA CAAGATCCTG ACCGCCGAAG AGGCCAAGGA CTACGGGATC
ATCGACACCG TCCTCGAGTA CCGGAAGCTG TCGGCTCAGA CGTCCTGA
 
Protein sequence
MSNQTDPRLQ PQARYILPSF IEHSSFGVKE SNPYNKLFEE RIIFLGVQVD DASANDIMAQ 
LLVLESLDPD RDITMYINSP GGSFTSLMAI YDTMQYVRAD IQTVCLGQAA SAAAVLLAAG
TPGKRLALPN ARILIHQPAL SGVIQGQFSD LEIQAKEIER MRTLMEVTLA RHTGKDPETI
RKDTDRDKIL TAEEAKDYGI IDTVLEYRKL SAQTS