| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_3624 |
|---|
| Symbol | |
|---|
| ID | 4611554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 3812288 |
|---|
| End bp | 3815263 |
|---|
| Gene Length | 2976 bp |
|---|
| Protein Length | 991 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639793300 |
|---|
| Product | ribonuclease |
|---|
| Protein accession | YP_939608 |
|---|
| Protein GI | 119869656 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1530] Ribonucleases G and E |
|---|
| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGACA GTGAAAATAC TCAAGCCCAA GACTCGCCGG ACTCTTCAGA AGAGGCTTCG
CCTCGCGAAA GACTTCCCGA ACGCCTGAGG GTGCACTCAC TGGCCCGGGT GCTGGGCACC
ACCAGCCGGC GGGTCCTCGA CGCACTGGCC GAACTCGACG GCCGCGCTCG CAGCGCGCAC
TCGACCGTCG ACAAGACCGA GGCCGAGCGG GTCCGCGAAG TGCTCGCCGG CAGCGACGGG
GACGCCCCCG TCGAAGCCCC GGCGCCCGCG GAGATCGCCG AGTCGGTCGC CGATGCCCCC
GAGGTGGTCA TCGAGACGGT CGAGTCGGTC GAGGTCACGA TCGACGTGGC TCCCGTCGGC
GACACCTCTG ACGTGCCGGA ACCCGAGGAC GAGCCGGAAT CGCGGACGAT CCTCGAGACG
GCCCCCGTCG AGCGGGCGGA CTACCTGCCG CTGTTCGTCG CACCCCAGCC GGTGCGGTTC
GAGCCCGCCG ACGAGGACGA CGACGAAGAC GAGGACGACG ACGTCGCCGC GTCGGCCGAC
AGCGAGGACG ACGACGAGGA CGACCAGTCG GAGCGGCCCG CCGCGCGGCG CCGCCGGCGG
GGACGCCGCG GCCGGGGCCG GGGGCGCGGC GAACAGAGCG ACGACAACGG GGAGCCCGAC
GCCGCCGAGG GCACCGAGAC GAAGACCGAC GGACAGGCCG ACTCCGATCA GGACACCGGC
GACGACTCCG ACGAGGACGG CGACGAGGAC ACCTCGGGTG GCGACGGCAG TTCGCGGAGG
CGTCGCCGCC GGCGTCGGCG CAAGTCCGGC GCGTCGGACG ACTCCGACAA CGGTTCACCC
GACGACCCGC CGAACACCGT CGTGCACGAA CGCCCGCCGC GTGAGCGGGG TGGCAAGTCC
GGCGACAGCG ACGACAACGA GATCCAGGGC ATCAGCGGCT CGACCCGGCT GGAAGCCAAG
CGGCAGCGCC GTCGCGACGG TCGGGACGCC GGACGCCGCC GCCCGCCGAT CCTGTCGGAG
GCCGAGTTCC TCGCCCGCCG CGAGGCCGTC GAACGCGTCA TGGTGGTGCG CGACAAGGTC
CGCACCGAAC CGCCCCACGA GGGTGCGCGC TACACCCAGA TCGCGGTGCT CGAGGACGGG
GTCGTCGTCG AACACTTCGT GACGTCGCCG GCCTCGGCGT CCCTGGTCGG CAACATCTAC
CTGGGCATCG TGCAGAACGT GCTCCCGTCG ATGGAGGCCG CGTTCGTCGA CATCGGTCGC
GGTCGCAACG GCGTGCTCTA CGCCGGTGAG GTGAACTGGG AGGCCGCGGG TCTCGGCGGG
CAGAACCGCA AGATCGAGCA GGCGCTCAAA CCCGGCGACT ACGTCGTCGT GCAGGTCAGC
AAGGATCCGG TCGGGCACAA GGGTGCCCGC CTGACCACGC AGGTGTCGCT GGCCGGCCGT
TACCTGGTGT ACGTGCCGGG TGCGTCGTCG ACCGGGATCA GCCGCAAGCT GCCCGACACC
GAGCGGCAAC GGCTCAAGGA GATCCTGCGC GAAGTGGTGC CCGCCGACGC CGGCGTGATC
ATCCGCACCG CGTCGGAGGG CGTGAAGGAA GACGACATCC GCTCCGACGT GAACCGGTTG
CAGGAGCGCT GGACACAGAT CGAGGCCAAG GCCGCCGAGA TCACCGCGAA GAAGGCCGGC
GCCGCCGTCG CGCTCTACGA AGAGCCCGAC GTGCTGGTCA AGGTGATCCG CGATCTGTTC
AACGAGGACT TCTCCGGGCT GATCGTCTCG GGTGACGAGG CGTGGAACAC CATCAACTCC
TACGTCGAGT CCGTGGCGCC CGACCTGATG CCGCGGCTGA CCAAGTACGA ACCGGCAGGC
AACCCCAACG GCGAGGGTCC GGACGTGTTC GCCGTGCACC GCATCGACGA ACAACTCGCC
AAGGCCATGG ACCGCAAGGT GTGGCTGCCG TCGGGCGGGA CGCTGGTCAT CGACCGCACC
GAGGCGATGA CCGTCGTCGA CGTCAACACC GGCAAGTTCA CCGGGTCGGG CGGCAACCTC
GAGCAGACGG TCACCCGCAA CAATCTCGAA GCGGCCGAGG AGATCGTGCG CCAACTGCGG
TTGCGCGACA TCGGCGGCAT CATCGTCATC GACTTCATCG ACATGGTGCT CGAGTCGAAC
CGCGATCTGG TGTTGCGGCG GCTGACCGAG GCGCTGGCCC GTGACCGCAC CCGCCACCAG
GTGTCCGAGG TGACCTCGCT GGGTCTGGTG CAGCTGACGC GTAAGCGGCT GGGCACCGGG
CTGATCGAGG CCTTCTCCAC CCCGTGTCCG CACTGTGCGG GGCGCGGCAT CGTGCTGCAC
GGCGATCCGA TCGACAACGC CTCGGGTAAC GGGCGCAAGT CCGAGCCGGG GACGGGCAGG
CGCAGCAAGC GCGGCAAGAA GGGCGGTAAG CCCGAGGAGG CGCCCGCGGC CGTGCCGGTG
ATCAAGGTGC CGCCGCACCC CGCCGGTGAG CACCCGATGT TCAAGGCGAT GGCCGCCGCG
AACGGCCGCG ACGACGAGTC CGAGGACGAG TCCGACGAGT CGGCCGATGA GCAGTCCGGT
GCGCGCGAGG ACGACACCGC CGAGAAGGTG CACGAGGCCG TCGGTGAAGA ACTCGACGAC
GAGGACTTCG AGGACGCGGA GGACGCGGAG GACTCCGACG ATTCCGATGA GGATGAGGAT
GAGGACGAGG ACGAGGATTC CGACGACTCC GATGAGGACG AGATCGACCT CGACAACGAC
GACGACGAAG AGGACGACGA CATCGAGGTC CTCGACGACG AGGATTCCGA CGAGGACGAG
GATTCCGACG AGGACGAGGA TTCTGACGAG GATTCCGACG AAGACTCCGA TGAGGACTCC
GATGACGAGG ACGAACCCGA GGTGATCGCG GTCCCGGTGC GGCGTCCGCG CCGACGCGCC
GCCGCACGTC CGGCGGGTCC GCCCAGCAGC GAGTAG
|
|---|
| Protein sequence | MADSENTQAQ DSPDSSEEAS PRERLPERLR VHSLARVLGT TSRRVLDALA ELDGRARSAH
STVDKTEAER VREVLAGSDG DAPVEAPAPA EIAESVADAP EVVIETVESV EVTIDVAPVG
DTSDVPEPED EPESRTILET APVERADYLP LFVAPQPVRF EPADEDDDED EDDDVAASAD
SEDDDEDDQS ERPAARRRRR GRRGRGRGRG EQSDDNGEPD AAEGTETKTD GQADSDQDTG
DDSDEDGDED TSGGDGSSRR RRRRRRRKSG ASDDSDNGSP DDPPNTVVHE RPPRERGGKS
GDSDDNEIQG ISGSTRLEAK RQRRRDGRDA GRRRPPILSE AEFLARREAV ERVMVVRDKV
RTEPPHEGAR YTQIAVLEDG VVVEHFVTSP ASASLVGNIY LGIVQNVLPS MEAAFVDIGR
GRNGVLYAGE VNWEAAGLGG QNRKIEQALK PGDYVVVQVS KDPVGHKGAR LTTQVSLAGR
YLVYVPGASS TGISRKLPDT ERQRLKEILR EVVPADAGVI IRTASEGVKE DDIRSDVNRL
QERWTQIEAK AAEITAKKAG AAVALYEEPD VLVKVIRDLF NEDFSGLIVS GDEAWNTINS
YVESVAPDLM PRLTKYEPAG NPNGEGPDVF AVHRIDEQLA KAMDRKVWLP SGGTLVIDRT
EAMTVVDVNT GKFTGSGGNL EQTVTRNNLE AAEEIVRQLR LRDIGGIIVI DFIDMVLESN
RDLVLRRLTE ALARDRTRHQ VSEVTSLGLV QLTRKRLGTG LIEAFSTPCP HCAGRGIVLH
GDPIDNASGN GRKSEPGTGR RSKRGKKGGK PEEAPAAVPV IKVPPHPAGE HPMFKAMAAA
NGRDDESEDE SDESADEQSG AREDDTAEKV HEAVGEELDD EDFEDAEDAE DSDDSDEDED
EDEDEDSDDS DEDEIDLDND DDEEDDDIEV LDDEDSDEDE DSDEDEDSDE DSDEDSDEDS
DDEDEPEVIA VPVRRPRRRA AARPAGPPSS E
|
|---|
| |