| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_3562 |
|---|
| Symbol | |
|---|
| ID | 4611492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 3753331 |
|---|
| End bp | 3754911 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639793238 |
|---|
| Product | prohead peptidase |
|---|
| Protein accession | YP_939546 |
|---|
| Protein GI | 119869594 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3740] Phage head maturation protease |
|---|
| TIGRFAM ID | [TIGR01543] phage prohead protease, HK97 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.530159 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACACGC GGGCAGTCGA GTTGACCGAG GTCCGCACCG ACGACGACGC CGGGACTTTT
ACCGGTCTCG CCGCCGGGTA CGACAACGTC GACACGCACG GCACCGTTCT ACAGCGCGGC
GCGTTCGCAT CATCGCTCGC CGGTGGCGGC GTCGTTCCGT TGTTCTGGGA ACACGGCCAC
GACGATCCGC GGGCCATCGT CGGCGAGGTG ACCGCGGCCG TTGAGACCAC CCGCGGGCTG
GAAATCGTCG GCAAGCTCGA CACCGACACC GAACGCGGCG CCGCCGCTTA CCGGGCGGTC
AAAGGCCGAC GTATCCGCGG TCTGTCGGTC GGGATGCGCC CGACGCAGCG GCGCGGGGCG
AGCATCATCG CCGCCGACCT CTGCGAAATC TCGCTGGTCA TGCGCCCCAG CAACAGCCGC
GCGCTCGTTG AGTCGGTCCG GTCGGCCGAC GACGCGCTTC AAACCCGGGC GGCCAGCGCG
GTCGCCACTT TCGAGACCAT CGCAAAGGAC ACCACCATGC CCGAGACCAT CACCACCGAA
CGCCGCGACG AGCTCGTGGC CGAGACCCGC GGGCTCGTGG CCGCCGCTCA GGGCCGCACG
CTGACCGCCG AGGAAGTCGC CACCATCGAG ACCAACACCG AGACGATCCG CCGCCACGAC
GAGCAGGCGT TGGAGACGCG CAACGACGCG CAGGCGGCGC GGCTGGCTCA GGCGCTCGGC
CAGGCCATCG ACACCCGTTC GGGCGGTCGG CAGTCGCCGT TCATGCTCAG CGCCGACAAC
GTCACCACGC TCGAGACCGC GCGCAAGCGC TTCGAGAACA TCACCGTTCT CGAGACCCGC
GCGGCGCTGG CGACCACCGA CATGGGCACC GCTCGCGAGT ACGGCCCGAA CGGTCTGCAG
GCGCCGCGGT CGCTGTGGCG TTCGGCCGGT ATCCCGACGA CCGCGCCCGA CGGGTACAGC
GGCGTGGTCC CGCAGTTCAC GCTGCCCGGT GGGGCGGTGC TCGTCGGTGA GGGCGTCGAC
CACCAGGAGT TCGACGGGGT GAACCCCGAC GCGGTGACGA TCGGCCGTGC CGGTGCGTGG
TCGACACTGA CCTCCGAGGC GCTGCTATCC ACGAGCATCA CCGAGGTTTC GGCCGCCCAC
GCGCGCATCA TCGCCCGCAA CGTTGACCGT GCGACGGTGG CGAAGATCGA AGATGCCAGC
CCGGACACGA TGAGCATTGA TCAGGCGTTG GTGACGGTGG CTGCCGAATG CGCCTGCGAT
GTCAGCGACT TGTGGATTGT CGGTGCGCCG GCCGCGGTGG CGGCGCTCGT CGGCAATGCG
ACCTTCACGC CCGCCAACGG CGGGGACGCA GAGTCCTACG CATCCCGCTA CGGCGGTGCG
GCGGTGTACC CGACGACCTC GGCGACCGCG GGCACGCTGA CGGTGTTTCA TCCCCAGAGT
TTCCGCGCGT TCGCGTCGCC GCTGTCGTCG GGCGTGTTCG TGGATCCGAA GTCGGGCAAG
CAGGACTTCG GTCAGTGGAT GTTCTTCGGG CTCGGTCAGG CGCTCGTGGG CGCCGCGATC
ACCGTGGACA CCACCCCATA G
|
|---|
| Protein sequence | MHTRAVELTE VRTDDDAGTF TGLAAGYDNV DTHGTVLQRG AFASSLAGGG VVPLFWEHGH
DDPRAIVGEV TAAVETTRGL EIVGKLDTDT ERGAAAYRAV KGRRIRGLSV GMRPTQRRGA
SIIAADLCEI SLVMRPSNSR ALVESVRSAD DALQTRAASA VATFETIAKD TTMPETITTE
RRDELVAETR GLVAAAQGRT LTAEEVATIE TNTETIRRHD EQALETRNDA QAARLAQALG
QAIDTRSGGR QSPFMLSADN VTTLETARKR FENITVLETR AALATTDMGT AREYGPNGLQ
APRSLWRSAG IPTTAPDGYS GVVPQFTLPG GAVLVGEGVD HQEFDGVNPD AVTIGRAGAW
STLTSEALLS TSITEVSAAH ARIIARNVDR ATVAKIEDAS PDTMSIDQAL VTVAAECACD
VSDLWIVGAP AAVAALVGNA TFTPANGGDA ESYASRYGGA AVYPTTSATA GTLTVFHPQS
FRAFASPLSS GVFVDPKSGK QDFGQWMFFG LGQALVGAAI TVDTTP
|
|---|
| |