Gene Mkms_3496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3496 
Symbol 
ID4611425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3672147 
End bp3673358 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content69% 
IMG OID639793171 
Productmajor facilitator superfamily transporter 
Protein accessionYP_939480 
Protein GI119869528 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.950594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.20666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGCC AACCCAAAGC CGTCTGGGCC GTAGCCTTCG CCTCCGTCGT GGCGTTCATG 
GGCATCGGCC TCGTCGACCC CATCCTCAAA CCGATCGCCG ACAACCTGAA CGCCTCCCCG
TCCCAGGTGT CGTTGCTGTT CACCAGCTAC ATGGCCGTGA TGGGGGTGGC GATGCTGATC
ACCGGCGTCG TCTCCAGCCG CATCGGCCCC AAGCGCACCC TGCTGCTCGG TCTGGTCGTG
ATCATCGCCG GCGCCGGTCT GGCCGGGATG AGCGGCACGG TCATGGAGAT CGTCGGATGG
CGCGCGCTGT GGGGTCTGGG CAACGCCCTG TTCATCGCGA CCGCGCTGGC CACGATCGTC
AACTCGGCGC GTGGCTCGGT GGCGCAGGCG ATCATCCTGT ACGAGGCCGC ACTCGGCCTC
GGTATCGCCG TCGGCCCACT CGTCGGCGGT CTGCTCGGTG AAATCTCTTG GCGCGGGCCA
TTTTTCGGCG TCTCGGCGCT CATGGTCGTC GCCGTGGTGG TCACCGCGAT CCTGCTGCCG
CCGACGCCGC GGCCGGAGCG GGCCACCACG CTGGCCGATC CGTTCCGCGC GCTGCGGCAC
CGCGGTCTGC TCGGCACGTC GATCACCGCG CTGCTCTACA ACTTCGGGTT CTTCACCCTG
CTCGCGTTCA CCCCGTTCCC CTTGGACATG TCCGCACAGC AGATCGGGCT GATCTTCTTC
GGGTGGGGGG TGGCGCTCGC GTTCACCTCG GTGGTCGTAG CGCCCCGGTT GCAGCACCGG
TTCGGCACCG TGCCCACACT GATCGTCAAC CTGCTCGCGA TGACGGCGAC GTTGGTCGTG
ATGGCGATCG GCACCGACAG CAAGGCAGTG CTGGCGACCT GTGTCGTGGT GGCCGGCCTG
TTCATCGGCG TCAACAACAC GCTGATCACG GAGACGGTGA TGAAGGCCGC CCCGGTCGAA
CGCGCGGTCG CGTCGGCCGC CTACAGCTTC CTGCGGTTCG GCGGTGCGGC CGTCGCCCCG
TGGCTGGCCG GTGTGCTCGG TGAGCAGGTC GACGTCCACC TCCCCTACTG GGTCGGCGCG
GGCGCGGTGC TGGCGGCCGC CGTCGTGCTG ACCGCCACCC GCGGACACCT GCGCGGTATC
GACGTCGAGG AAGACGAGCT CACCGAACGC ACCGACGAGG CCCGAGCCGT GACGGTCGGA
AGCGAGACCT AG
 
Protein sequence
MWRQPKAVWA VAFASVVAFM GIGLVDPILK PIADNLNASP SQVSLLFTSY MAVMGVAMLI 
TGVVSSRIGP KRTLLLGLVV IIAGAGLAGM SGTVMEIVGW RALWGLGNAL FIATALATIV
NSARGSVAQA IILYEAALGL GIAVGPLVGG LLGEISWRGP FFGVSALMVV AVVVTAILLP
PTPRPERATT LADPFRALRH RGLLGTSITA LLYNFGFFTL LAFTPFPLDM SAQQIGLIFF
GWGVALAFTS VVVAPRLQHR FGTVPTLIVN LLAMTATLVV MAIGTDSKAV LATCVVVAGL
FIGVNNTLIT ETVMKAAPVE RAVASAAYSF LRFGGAAVAP WLAGVLGEQV DVHLPYWVGA
GAVLAAAVVL TATRGHLRGI DVEEDELTER TDEARAVTVG SET