Gene Mkms_3483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3483 
Symbol 
ID4611411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3657971 
End bp3659650 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content71% 
IMG OID639793157 
Producthypothetical protein 
Protein accessionYP_939467 
Protein GI119869515 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0351251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAACG ACCAGATCCT CGCCGCCCTG TTGCGGAGGG CGGCACCGTC ACTACTCGTC 
GTCGCCGCGG TGGCCGCCGG CGGCTGTTCG GCGTCGAGCG AGCCGGCAGC CGCACCGTCG
CCGCCCCAGG CGGTGACCGC GCCGTCGGCC ACCCCGAGGG CCGCAGCCGA ACCGCCGAGA
CTGCGCCTGG CGGCCGACCC CGCGAGGATC GTCGACGACC TCGTCGCCGA CGAGCAGGCG
CTGCGCGATC CGTCGTCCCC GGAGGAGGTG CGGCGGGCGG CCGCGCGGCG CCAGCAGCTG
GCCTACCGCG CACTGGGACA TCACCCCGAG TGGGACCCCG TCGTGCGGCC GCGGGTGCCG
GCGCCGCTGC TCGAGATCTA CGACCGCAAC GTCAGCGCCC GGCGCCAGTT GTCGTCGCTG
AGCAAGGGCG ACGCCAAACC GACCCTGCCG GCCTGGCGGA TCGTCGAGCC GCGGCCCGCC
GAGGAGTTGA TGGGCTACTA CCGCAAGGCC GAGGCGACCT TCGGCGTCGG CTGGAACTAC
CTGGCGGCGA TCAACCTGGT GGAGACGGCG TTCGGGCGCA TCGCCGGGGT GAGTACGGCA
GGCGCCCAGG GGCCGATGCA GTTCATGCCC GCGACGTTCG CGGCCTACGG GGCCGGTGGC
GACATCACCT CACCCCACGA CAGCATCATG GCCGCGGGCC GCTACCTCGC CGCCAACGGC
TTCACCCGCA ACCCCGATGC CGCGCTGTGG CGGTACAACA ACTCGAACGA GTACGTGCGG
GCGGTGAGCG ACTATGCGGC GGTGATGGCC CGCGATCCGG CGGCGTTCGC CGGATTCCAC
CGCTGGGACG TCTACTACAA CTCGACCGCC GGAGACGTGG CGCTGCCCGT CGGGTACTCC
GCGACCGCAC CGGTTCCGGT CACCGATTAT CTGGCCGCAC ACCCCCTCGA ACCGCCGGTC
GTCCGCGTCT CGCCCCGCAG CGAACAGATC CTCGGGGATC TGCTGCGGGT CCGCAACGGC
GCTCTGCACG AACGGGTTCC GTCCCTGGCC GAGGCGGTGT CGGGAAAATT CCTCGGGGTG
CCCTACGGCG CGAACACACT CGTCGGTTCG CCGACCCGGC CCGAGGAACT CATCGTCAAC
GTCGAGGCGG TGGACTGTTT CACCTACGCC GACTACGTGG AGGCGCTCAA ACGCGCCGAC
GACCGCGAGG AGTTCATCGA CCGCCTCATC GAGGTGCGAT ACAAGGGCGG TGTCGTCGGA
TTCCGGAACC GGAAGCATTT CTTCACGGAC TGGTCGACCG CGACACCGGC GATCGCGACG
GATGTGACCG CGGATCTCGG CGCGAAGTCG GTCACGGTGG CCAAGCGCCT CAACCAGAAG
GACGGTGGCG GGGTGTATCT GCCAGGGCTG CCGGTGGTCC CCCGTCAGGT CTCCTACCTC
CCGAGTGCCG AGATCGACGA CGCTGTCGTG GCCGGTCTGC GCACCGGTGA CTATGTCGGG
GCGTACGCGG AGGACGGCGG CCTCGACGTC ACGCACGTCG GGATCTTCGT CGACGGACCC
GACGGACCGG TCGTGCGGAA CGCCTCGTCG CTGCGGGCGA ACAACAAGGT GGTCGACGAG
CCGTTCGGCG ACTACCTGCG CACCATCCCG GGCATCGTGG TGCTGCGCCC GACCCGGTGA
 
Protein sequence
MSNDQILAAL LRRAAPSLLV VAAVAAGGCS ASSEPAAAPS PPQAVTAPSA TPRAAAEPPR 
LRLAADPARI VDDLVADEQA LRDPSSPEEV RRAAARRQQL AYRALGHHPE WDPVVRPRVP
APLLEIYDRN VSARRQLSSL SKGDAKPTLP AWRIVEPRPA EELMGYYRKA EATFGVGWNY
LAAINLVETA FGRIAGVSTA GAQGPMQFMP ATFAAYGAGG DITSPHDSIM AAGRYLAANG
FTRNPDAALW RYNNSNEYVR AVSDYAAVMA RDPAAFAGFH RWDVYYNSTA GDVALPVGYS
ATAPVPVTDY LAAHPLEPPV VRVSPRSEQI LGDLLRVRNG ALHERVPSLA EAVSGKFLGV
PYGANTLVGS PTRPEELIVN VEAVDCFTYA DYVEALKRAD DREEFIDRLI EVRYKGGVVG
FRNRKHFFTD WSTATPAIAT DVTADLGAKS VTVAKRLNQK DGGGVYLPGL PVVPRQVSYL
PSAEIDDAVV AGLRTGDYVG AYAEDGGLDV THVGIFVDGP DGPVVRNASS LRANNKVVDE
PFGDYLRTIP GIVVLRPTR