Gene Mkms_3480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3480 
Symbol 
ID4611408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3655120 
End bp3655878 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content68% 
IMG OID639793154 
ProductNADH ubiquinone oxidoreductase, 20 kDa subunit 
Protein accessionYP_939464 
Protein GI119869512 
COG category[C] Energy production and conversion 
COG ID[COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0484096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCAC CCACGCTGGG GGTCTGGAAG TTCGCCTCGT GCGACGGCTG TCAGCTGACC 
CTGCTCGATT GTGAGGACGA ACTGCTCACC CTCGCCGGTC AGGTGCAGAT CGCCACCTTC
CTCGAGGCGT CGAGCGCGAT CCTGGGTGGT CCCTACGACG TGTCGCTGGT CGAGGGTTCG
ATCACCACCG CGGCGGATGA ACGGCGCATC AAGGAGATTC GCGAGCAGTC GAGGGTGCTG
GTGACCATCG GCGCTTGTGC GACCGCCGGC GGAGTCCAGG CCCTGCGCAA CTTCGCCGAC
GTCGACGAGT TCGCCTCGGT CGTCTACGCC CGGCCCGACT ACATCGACAC GTTGGCGACC
TCCACCCCGG CGGCGGCCCA CGTCGAGGTC GACTATCAGC TGCAGGGCTG CCCGATCGAC
CGTGGCCAGT TGCTCGAGAC CCTGGCCGCG CTGCTGGTGG GGCGCAAACC GCGGCTGCCG
GCCAAGACGG TGTGCACCGA ATGCAAACTC CGCGGGGTGA CGTGCGTGAT GGTCGCCGAG
GGCGTGCCCT GCCTCGGGCC GGTGACGCAC GCCGGTTGCG GTGCACTGTG TCCGACGTAT
CACCGCGGGT GCTACGGGTG TTTCGGTCCC GCGGCGACGC CGAACACCGC CGCGCTCATC
CCGGTGCTGC GCCGTGACGG GATGTCGGGC GGTGACGTCG ACCGGGTGTT CTCGACGTTC
AACGTCGCGA AGTTCGCCGA GCACCGGGAC GATACGTGA
 
Protein sequence
MSPPTLGVWK FASCDGCQLT LLDCEDELLT LAGQVQIATF LEASSAILGG PYDVSLVEGS 
ITTAADERRI KEIREQSRVL VTIGACATAG GVQALRNFAD VDEFASVVYA RPDYIDTLAT
STPAAAHVEV DYQLQGCPID RGQLLETLAA LLVGRKPRLP AKTVCTECKL RGVTCVMVAE
GVPCLGPVTH AGCGALCPTY HRGCYGCFGP AATPNTAALI PVLRRDGMSG GDVDRVFSTF
NVAKFAEHRD DT