Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_3465 |
Symbol | |
ID | 4611393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | - |
Start bp | 3634464 |
End bp | 3636797 |
Gene Length | 2334 bp |
Protein Length | 777 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639793139 |
Product | RNA-binding S1 domain-containing protein |
Protein accession | YP_939449 |
Protein GI | 119869497 |
COG category | [K] Transcription |
COG ID | [COG2183] Transcriptional accessory protein |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0520742 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTTCGA GCCTGACCGT CAGATCCGTA AATGCCCGTC TCGCTGAGGA ACTCGCCGTC GGTGAGGGGC AGGTCGCGGC CGCCGTCCGG TTGCTCGACG AAGGCGCCAC CGTGCCGTTC ATCGCCCGCT ACCGCAAGGA GGTCACCGGC AGCCTCGACG ACGCGCAACT GCGCACGCTC GAAGAACGCC TGAACTACCT GCGGGAACTC GACGAGCGGC GGGCGGCGGT GCTGGCCTCC ATCGAGGAGC AGGGCAAACT CACCGACGAC CTCAGAACCG CGCTGCTGAC CGCCGACACC AAGTCGCGGG TCGAGGACAT CTACCTGCCG TACAAGCCGA AGCGGCGCAC GAAGGCGCAG ATCGCCAGGG AGGCGGGCCT CGAACCGCTC GCCGACCGCC TGCTCGCCGA TCCGACGCTG GTCCCCGAGG ATGCAGCGGC TCGGTTCCTC GCCGACGGTG TGCCCGACGC TGCCGCCGCA CTCGACGGGG CGCGCCACAT CCTGATCGAG CGTGCGGCCG AGGACGCCGA TCTGGTCGGC GCCGTACGCG AGAAGTTCTG GACCGACGGG GCGCTGCGCA CCTCACCCCG CTCCGACGAG GTCGCCAAGA CCCCGGCGGC CCAGAAGTTC CGCGACTACT TCGAATTCTC CGAACCCCTG CAGAACATGC CGTCGCACCG CGTGCTCGCG GTGATGCGCG GCGAGAAGGA AGAGGTGCTG TCGCTGAACT TCGACGGGGG AGACGACGAC CTCTACCTCG CGATGGTGGC CCAGACCCTG GGCATCGACA TGGCGTCGAC GGCCCCGGCG ACACCGTGGC TGGCGACCAC CGTCCGGTTG GCGTGGCGGG TCAAGCTGAT GGTCTCGGCG GCCGTCGCCG CACGTGTCCG CCTGCGGCAA CGCGCGGAAG AGGATGCGGT CGCGGTGTTC GCCCGCAACC TCAAGGACCT GCTGCTCGCC GCCCCCGCGG GTTCCCGGAC CACCCTGGGC CTCGACCCGG GCTTCCGCAC GGGTGTCAAG GTGGCCGTCG TCGACGGCAC CGGCAAGGTC GTCGACACCT GCGCGATCTT CCCGCATCAG CCGCAGAAGC AGTGGGATCA GGCCAAGGCC ACGCTCGCGG CGCTCGTCGC CCGCCACGGG GTCGAGTTGA TCGCCGTCGG CAACGGCACC GCATCGCGCG AAACCGACGC GCTGGCAGCC GAACTCATCG CCGACATCGC GGCGGCGGGG GCCAAGGCGC CGGTGAAGGC GATGGTCAGC GAGGCCGGGG CGTCGGTGTA CTCCGCCTCG GCGTACGCCG CGCACGAACT GCCCGCGCTG GACGTGACGT TGCGGGGTGC GGTGTCCATC GCACGCCGGT TGCAGGATCC GCTCGCCGAA CTGGTCAAGA TCGAGCCGAA GTCGATCGGG GTGGGCCAGT ACCAGCACGA CGTGACGCCG GGGACCCTGG CGCGCAGCCT CGACGCCGTG GTCGAGGACG CCGTCAACGC CGTCGGCGTC GACCTGAACA CCGCGTCGGT GCCGCTGCTG TCCCGGGTGT CGGGTGTCAC CGACACGCTC GCCGAGGCCA TCGTCGCCCA CCGTGAGAAG ACCGGGCCGT TCCGCAACCG CACAGCACTG CTGGACGTCC CGCGCTTGGG GCCCAAGGCT TTCGAACAGT GCGCGGGCTT CCTCCGGATC ACCGGCGGGG ACGATCCGCT GGACGCCTCC GGTGTGCACC CCGAGGCCTA CCCGGTGGTG CGGCGCATCC TCGACCGGTC GGGGGTCACC CTGACCGAGA TCATCGGCAA CGAACGGCAG CTGCGCTCGC TCAAACCCGC CGACTTCGCC GACGACCGGT TCGGCATCCC GACCGTCAGC GACATCCTGG CCGAACTCGA GAAGCCCGGC CGTGACCCCC GGCCGGCGTT CTCGACGGCG ACGTTCGCGG CCGGTGTCGA GAAGGTGGCC GATCTGAAGG TCGGCATGGT GCTCGAGGGG GTGGTGACCA ACGTCGCCGC GTTCGGGGCG TTCGTCGACG TCGGCGTGCA CCAGGACGGG CTGGTCCACG TCTCCGCGAT GGCCGACCGT TTCGTCTCCG ATCCGCACGA GGTGGTGCGG TCCGGTCAGG TGGTGCGGGT CAAGGTCGTC GAGGTCGACG TGGACCGGCA GCGGATCGGG CTGAGCCTGC GCCTGGGCGA CACACCGCAG CGCGACAAGG CCAAACCGCG CCAGAACGCC GGCGCGCCGC GGCCACAGCA GAAGCGAAAC CCCAAGCGCG ACAACGATCG TCGCGAGAAG GCACCGTCGG GGTCGATGGC GCAGGCGCTG CGCGACGCCG GCTTCGGTCG GTAG
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Protein sequence | MTSSLTVRSV NARLAEELAV GEGQVAAAVR LLDEGATVPF IARYRKEVTG SLDDAQLRTL EERLNYLREL DERRAAVLAS IEEQGKLTDD LRTALLTADT KSRVEDIYLP YKPKRRTKAQ IAREAGLEPL ADRLLADPTL VPEDAAARFL ADGVPDAAAA LDGARHILIE RAAEDADLVG AVREKFWTDG ALRTSPRSDE VAKTPAAQKF RDYFEFSEPL QNMPSHRVLA VMRGEKEEVL SLNFDGGDDD LYLAMVAQTL GIDMASTAPA TPWLATTVRL AWRVKLMVSA AVAARVRLRQ RAEEDAVAVF ARNLKDLLLA APAGSRTTLG LDPGFRTGVK VAVVDGTGKV VDTCAIFPHQ PQKQWDQAKA TLAALVARHG VELIAVGNGT ASRETDALAA ELIADIAAAG AKAPVKAMVS EAGASVYSAS AYAAHELPAL DVTLRGAVSI ARRLQDPLAE LVKIEPKSIG VGQYQHDVTP GTLARSLDAV VEDAVNAVGV DLNTASVPLL SRVSGVTDTL AEAIVAHREK TGPFRNRTAL LDVPRLGPKA FEQCAGFLRI TGGDDPLDAS GVHPEAYPVV RRILDRSGVT LTEIIGNERQ LRSLKPADFA DDRFGIPTVS DILAELEKPG RDPRPAFSTA TFAAGVEKVA DLKVGMVLEG VVTNVAAFGA FVDVGVHQDG LVHVSAMADR FVSDPHEVVR SGQVVRVKVV EVDVDRQRIG LSLRLGDTPQ RDKAKPRQNA GAPRPQQKRN PKRDNDRREK APSGSMAQAL RDAGFGR
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